| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0824 |
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| Symbol | |
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| ID | 4603076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1008819 |
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| End bp | 1010549 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780159 |
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| Product | DNA primase |
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| Protein accession | YP_926701 |
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| Protein GI | 119773961 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0132507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAATAC CTCGTGATTT CATCAATGAT CTGATAGCCA GAACGGACAT AGTCGAGCTT
ATCGACCGTA AAGTGCCGCT CAAAAAAGCA GGTAAGAACT ATTCTGCCTG TTGTCCCTTC
CACAGCGAAA AATCACCTTC ATTTACCGTC AGCAGAGACA AGCAGTTTTA TCACTGTTTC
GGTTGTGGCG CCCATGGTAA TGCCATCGAC TTCGTGATGG AGTACGACCG GCTTAACTTT
GTCGACGCCA TTGAAGACCT GGCAGGACAG CTGGGGTTGG AAGTCCCGCG GGAGCAAGGC
ACTGGTCCTC GCCGCGACGA GGGACTCGCC CGGGATCTGT ATCAGCTGAT GGAAGAGGCC
GCGAGGCATT ATCAGACACA ACTGCGTCAG CACGCCGACA AACAAAAAGT CGACGAGTAT
CTGGCACTGC GTGGGCTGAG CAAAGAAGTC GTTGAAGACT TTGGTATCGG TTTTGCCCCC
GATGGCTGGG ATGGTCTGTT GGGTCGCTAT CGTACCAACC CGGATGCCCA GGACAAGCTG
CTGACCGGCG GCATGTTGAT TGAAAACGAT GGTGGCAAGC GATACGACCG CTTCCGCGAT
CGTTTGATGT TTCCTATTCG CGACAGGCGC GGTCGGGTCA TAGGTTTCGG TGGCCGGGTG
CTGGGTGATG GCACACCAAA ATATTTGAAT TCGCCGGAAA CGCCCATATT TCATAAGGGA
CAGGAACTCT ACGGTCTCTA TGAGCTGAAG CAAAAGCATC GCGATCCAGA GCGGGTCATG
ATTGTGGAAG GCTACATGGA CGTGGTGGCG TTGGCACAAT TTGGCATCGA CTACGCGGTG
GCCTCTCTGG GCACCTCGAC AACCGCAGAG CAATTTCAGT TGCTGCTGCG CAGTGCCAAA
GAAGTCATCT GTTGTTATGA CGGTGACAAA GCCGGTTATG AGGCTGCCTG GCGGGCAATG
GAAACCGCCC TGCCGCTGCT CAAACCCGGC GACAAAGTGA CATTTTTGTT CCTCCCTCAG
GGAGAAGATC CGGACTCGCA AGTCCGCAAA GAAGGCAAAG AAGCCTTTGA AATGCGCATC
GATAATGCGC TGCCACTGGC CGATTATTTG TTCGACACCT TGTCGCAGAA ATACGGCACA
GATAAAGGCA ACCTGGCTAA GCAGGCCATT GCTCTGATTG AAAAAATTAA AGACACGGTT
CTTGCCAATC TGCTGCTGGA AAACCTTGCC CATAAACTTG GGATGAACTC CAGTGAAGAT
CTCAGGAAAA AACTCGGTCT AACCAGTATG TCCACTGGTG CCAAGGCGAT GGCGAAAAAA
GGACTCAAAG GACGGGGTAC ACCGCTGCGA CTGGCCATTT CACTGCTGGT GCAACACCCC
GAACTGGGAC ACAAACTGCC GGTTCAGCCG GCATTGAGCC ACATTCGCAT GACGGGTATT
GAGCTGCTCA TCCAACTGTT GGAGCTCACC CGGGAACAGG TGCTCTCCAC AGCCCAACTG
CTCGAGTCCT ATCGTGACAG CGAGCATTGG GGGCCGTTAA CTAAACTGGC CCAGTGGGAA
CACCAGATTG CCGAAGATAA TGTGGCCCAG GAATTTCGCA AAGCGCTGGT ATGGCTTAAT
AATCAATACA TAGAGCAGCG CTACCAGGAG CTCAGCATTA AACCCGACTT AACCCGGGAA
GAAAAGCTGC AACTCCAAAA GCTTATCGTT GTGATGAAGG GCATGAAGTA G
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| Protein sequence | MAIPRDFIND LIARTDIVEL IDRKVPLKKA GKNYSACCPF HSEKSPSFTV SRDKQFYHCF
GCGAHGNAID FVMEYDRLNF VDAIEDLAGQ LGLEVPREQG TGPRRDEGLA RDLYQLMEEA
ARHYQTQLRQ HADKQKVDEY LALRGLSKEV VEDFGIGFAP DGWDGLLGRY RTNPDAQDKL
LTGGMLIEND GGKRYDRFRD RLMFPIRDRR GRVIGFGGRV LGDGTPKYLN SPETPIFHKG
QELYGLYELK QKHRDPERVM IVEGYMDVVA LAQFGIDYAV ASLGTSTTAE QFQLLLRSAK
EVICCYDGDK AGYEAAWRAM ETALPLLKPG DKVTFLFLPQ GEDPDSQVRK EGKEAFEMRI
DNALPLADYL FDTLSQKYGT DKGNLAKQAI ALIEKIKDTV LANLLLENLA HKLGMNSSED
LRKKLGLTSM STGAKAMAKK GLKGRGTPLR LAISLLVQHP ELGHKLPVQP ALSHIRMTGI
ELLIQLLELT REQVLSTAQL LESYRDSEHW GPLTKLAQWE HQIAEDNVAQ EFRKALVWLN
NQYIEQRYQE LSIKPDLTRE EKLQLQKLIV VMKGMK
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