| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0821 |
|---|
| Symbol | |
|---|
| ID | 4603073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 1004610 |
|---|
| End bp | 1004948 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639780155 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase FkbP |
|---|
| Protein accession | YP_926698 |
|---|
| Protein GI | 119773958 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAC TCCAAATAGA AGATGTGATT GAGGGCGAGG GTAAGGCGGC GGTAAAGGGC
GCCCTTATTA CTACGCACTA CCGTGGTTGG CTCGCCGATG GCACCCAGTT TGATTCCTCC
CATGACAGGG GCCAGGCATT TCAGTGCGTG ATAGGCACAG GTCGGGTTAT CAAGGGATGG
GATCAGGGCA TTATCGGCAT GAAGGTCGGT GGTAAGCGTC GTTTGCAGGT GCCTGCGCAT
CTGGCCTATG GTGAGCGCCA GATTGGCAAT ATGATCCCGC CAAACTCGGA TTTGACCTTC
GAGATTGAAC TGCTGGAAGT CTTAACCCGG GATGACTGA
|
|---|
| Protein sequence | MSELQIEDVI EGEGKAAVKG ALITTHYRGW LADGTQFDSS HDRGQAFQCV IGTGRVIKGW
DQGIIGMKVG GKRRLQVPAH LAYGERQIGN MIPPNSDLTF EIELLEVLTR DD
|
|---|
| |