| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0818 |
|---|
| Symbol | |
|---|
| ID | 4603070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 1002432 |
|---|
| End bp | 1002983 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639780152 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_926695 |
|---|
| Protein GI | 119773955 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATAA CATCAGCAAG CAAAGCATTG AAAAGGCTGT CAGGTGCGCT ACTGCTGGTT
GCACTCGGTT CCTTTACGGG AGCCGCCATC AGTGCGGATA ACCCACTCGA TGGCATGCAC
CGTGTGGGCA AAGGCAAAAT GAATTGGCTG TGGCTTGAGC TTTACCATGC CAGCCTTTTT
ACGGTCGATG GTCAATACCA GCACGGGCGC TATCCTCAGG CACTGGAAAT TCAGTACTCG
CGGGATATCG AAGCCAAAGA CTTGCTGGAT GCCACTGGCA GCGAATGGCA AAAGCAGGGT
TTGAATGAGG CCCAGGTGAA AGCGTTTTTG GCTAAACTCG CCCCCCTGTG GGTGGATGTG
CAGCGGGGCG ATACCCTGCT GCTGGTGGCA AGCGATGAAA GCCATGGCGA ATTTTTCCAT
AACGGCCAAT CCCTTGGCAA AGTGAATGAT ACAGGTTTGA TGCAAGCCTT TTTGGGAATT
TGGCTTAGAG ACGACACCAG TGAACCCACC CTCAGGGCAC AGCTTTTGGG AGAAACCTCA
TGCGACTGCT AG
|
|---|
| Protein sequence | MAITSASKAL KRLSGALLLV ALGSFTGAAI SADNPLDGMH RVGKGKMNWL WLELYHASLF
TVDGQYQHGR YPQALEIQYS RDIEAKDLLD ATGSEWQKQG LNEAQVKAFL AKLAPLWVDV
QRGDTLLLVA SDESHGEFFH NGQSLGKVND TGLMQAFLGI WLRDDTSEPT LRAQLLGETS
CDC
|
|---|
| |