Gene Sama_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0815 
Symbol 
ID4603067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp999889 
End bp1000683 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content53% 
IMG OID639780149 
Producthypothetical protein 
Protein accessionYP_926692 
Protein GI119773952 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCG GCATCTTTTT TGGTCATGTG AGTCATCAGC GGCTGGGGGC GGTGCGCCAC 
AGCTTCAGTT ACCCCATGGC CATGCTGGTG ATGGATCTGG ACGAGCTGCC CAGGCTTGCC
CACCTCAGTG CTGTGTTTGG TCTGTCGTGG TTTCGGCCGC TGCGATTTCG TGCAGGTGAT
TATCTGATTG CAAATAGCCC CGCTGATAAA ACATATGGCA AAGGTGACAC ACCGGAAAAT
GCTGTGCAGG CGTTAAAAGC ACGGGTGCTT GCCAAAGCAC GGGACCTTGG CGCCGACGGA
GAGTTTAACC GGGTGGTGTT TGCCGGTCAG GTGCGCCATT TTGGCTTTTA TTTCAGCCCG
GTGAACTTCT TCTTTTTATG TGATGGCGAT ATGCAGCGTT ACCTGCTGGC AGAGGTGAGT
AACACGCCCT GGAATGAGCG CCATTGCTAT CTGGTTGATA TCGCACAGGC CCACGACAGA
GGACAGGCTG TGAACGACAA GGTGTTTCAC GTTTCGCCCT TTATGACTCT GGATATGCGT
TACCGCTGGC AGATTGAGGC GAATAACGAA CGTTTCCACC TTCAAATCGA TAACGAGCGT
GAAGGTGGCG AGCGGCTGTT TCGTGCCGGT TTGCAGCTGC GTGGTCAGGC CTTTGATAAG
GCAGGGTTGA ATCAATTTTT TAAACGTTTT CCTATGCTTA CAGCATATAT CCTGTATGGC
ATTTATCGGC AGGCCCTGAG CCTGTTTCGA AAAGGTGTGA CTTTTGTGGC CCACCCCGGG
CCGGTGGAGA AATAA
 
Protein sequence
MNSGIFFGHV SHQRLGAVRH SFSYPMAMLV MDLDELPRLA HLSAVFGLSW FRPLRFRAGD 
YLIANSPADK TYGKGDTPEN AVQALKARVL AKARDLGADG EFNRVVFAGQ VRHFGFYFSP
VNFFFLCDGD MQRYLLAEVS NTPWNERHCY LVDIAQAHDR GQAVNDKVFH VSPFMTLDMR
YRWQIEANNE RFHLQIDNER EGGERLFRAG LQLRGQAFDK AGLNQFFKRF PMLTAYILYG
IYRQALSLFR KGVTFVAHPG PVEK