Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0815 |
Symbol | |
ID | 4603067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 999889 |
End bp | 1000683 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639780149 |
Product | hypothetical protein |
Protein accession | YP_926692 |
Protein GI | 119773952 |
COG category | [S] Function unknown |
COG ID | [COG3496] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCG GCATCTTTTT TGGTCATGTG AGTCATCAGC GGCTGGGGGC GGTGCGCCAC AGCTTCAGTT ACCCCATGGC CATGCTGGTG ATGGATCTGG ACGAGCTGCC CAGGCTTGCC CACCTCAGTG CTGTGTTTGG TCTGTCGTGG TTTCGGCCGC TGCGATTTCG TGCAGGTGAT TATCTGATTG CAAATAGCCC CGCTGATAAA ACATATGGCA AAGGTGACAC ACCGGAAAAT GCTGTGCAGG CGTTAAAAGC ACGGGTGCTT GCCAAAGCAC GGGACCTTGG CGCCGACGGA GAGTTTAACC GGGTGGTGTT TGCCGGTCAG GTGCGCCATT TTGGCTTTTA TTTCAGCCCG GTGAACTTCT TCTTTTTATG TGATGGCGAT ATGCAGCGTT ACCTGCTGGC AGAGGTGAGT AACACGCCCT GGAATGAGCG CCATTGCTAT CTGGTTGATA TCGCACAGGC CCACGACAGA GGACAGGCTG TGAACGACAA GGTGTTTCAC GTTTCGCCCT TTATGACTCT GGATATGCGT TACCGCTGGC AGATTGAGGC GAATAACGAA CGTTTCCACC TTCAAATCGA TAACGAGCGT GAAGGTGGCG AGCGGCTGTT TCGTGCCGGT TTGCAGCTGC GTGGTCAGGC CTTTGATAAG GCAGGGTTGA ATCAATTTTT TAAACGTTTT CCTATGCTTA CAGCATATAT CCTGTATGGC ATTTATCGGC AGGCCCTGAG CCTGTTTCGA AAAGGTGTGA CTTTTGTGGC CCACCCCGGG CCGGTGGAGA AATAA
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Protein sequence | MNSGIFFGHV SHQRLGAVRH SFSYPMAMLV MDLDELPRLA HLSAVFGLSW FRPLRFRAGD YLIANSPADK TYGKGDTPEN AVQALKARVL AKARDLGADG EFNRVVFAGQ VRHFGFYFSP VNFFFLCDGD MQRYLLAEVS NTPWNERHCY LVDIAQAHDR GQAVNDKVFH VSPFMTLDMR YRWQIEANNE RFHLQIDNER EGGERLFRAG LQLRGQAFDK AGLNQFFKRF PMLTAYILYG IYRQALSLFR KGVTFVAHPG PVEK
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