| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0808 |
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| Symbol | |
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| ID | 4603060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 991771 |
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| End bp | 993069 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780142 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_926685 |
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| Protein GI | 119773945 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCG AATCCTACAG TTTTGCCCCC GAAATACTGC AAGCCCTTGC CGAATGCGGT
TATGAAACCA TGACCCCCAT TCAACGGCTG GCCATTCCCC CTGTCCGTCG CGGCCAGGAC
GTATTGGCTT CTGCCCAAAC GGGAACCGGG AAAACTGCGG CTTTCGCATT GCCAATCCTG
CAAAAGCTGC TGGACACGCC CAAGGCCAGA GAAGCGACCA AAGCCCGCGC GCTTATTCTT
GCTCCAACCC GCGAGCTGAC AGAGCAGATT GCCAACAATA TCAAAGCCTA TGCCAAACAT
CTTGAACTGG CCGTTACCAC GGTATTCGGT GGCGGAAAAA CCGATGTTCA GGCGCAAAAG
CTGCGTAAAG GCACAGATAT CATAGTGGCC ACGCCGGGGC GCTTACTCGA ACACTTGCTG
GCGGGTAACC TGTCGTTGGC AGCCGTTGAA TTTTTGGTGT TGGATGAAGC CGACCGTATG
CTGGACATGG GCTTTATCGC CGATATCCAA AAGCTCATCC AGGCCTGTAA TAAAGAGCGC
CAGACCCTGA TGTTCTCGGC CACCTTCTCC GGTGGAGTGC GCAAGCTTGC CGATGAGATC
ATGAAAAAGC ACACAGTACT GACCGCCGAC AGACACAACA CTGCCGCTAC AACCGTGAGC
CAGGTAGTGT ACCCGGTGGA GCAGCGCCGC AAACGCGAAC TCTTGTCTGA ACTCATTGGC
CGTAAAAACT GGCAACGGGT GCTGGTATTC TCGGCGACCC GTGAAGACTG TGAAAAACTT
ACCGAAGAAC TGAACCTCGA CGGCATCCCA AGCGCGGTGA TCCACAGCGA AAAAGCCCAG
GGCACCCGCA GAAGAGCCCT GAAAGACTTT ACCGAAGGCA AAATTCGGGT GCTGGTATCC
ACTGAAGTGG CTGCCCGCGG TCTGGATATC CCGGACCTTG AATATGTGGT GAACTTCGAC
CTGCCCTTCC TGCCAGAAGA CTATGTGCAC AGGGTTGGCC GCACAGGCCG TGCTGGAAAG
AGTGGCGTTG CCATCAGTTT TGTCAGCCGC GAAGAAGAGC GCACCCTGGC CGACATTGAA
AAACTCATTG GCCAGCGTCT CAAGCGCATC GTGATGCCGG GCTATGAAGT GTCCAACCGT
GACCTCTTGC TCAAGCAGTT GCAAAAGCGT CGCAGCTTTG CGAAAAAGAC CCGGGTCGAA
AGTGACGCCA TTGCTCAGGT TGCCGCCGAA AAGAGCATGG CCGGACGCCG CGTTAAGGTG
AAAGTCGGTT CAACCGGCAA CACCAAAAAA ATCAAATAA
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| Protein sequence | MKFESYSFAP EILQALAECG YETMTPIQRL AIPPVRRGQD VLASAQTGTG KTAAFALPIL
QKLLDTPKAR EATKARALIL APTRELTEQI ANNIKAYAKH LELAVTTVFG GGKTDVQAQK
LRKGTDIIVA TPGRLLEHLL AGNLSLAAVE FLVLDEADRM LDMGFIADIQ KLIQACNKER
QTLMFSATFS GGVRKLADEI MKKHTVLTAD RHNTAATTVS QVVYPVEQRR KRELLSELIG
RKNWQRVLVF SATREDCEKL TEELNLDGIP SAVIHSEKAQ GTRRRALKDF TEGKIRVLVS
TEVAARGLDI PDLEYVVNFD LPFLPEDYVH RVGRTGRAGK SGVAISFVSR EEERTLADIE
KLIGQRLKRI VMPGYEVSNR DLLLKQLQKR RSFAKKTRVE SDAIAQVAAE KSMAGRRVKV
KVGSTGNTKK IK
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