Gene Sama_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0802 
Symbol 
ID4603054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp985300 
End bp986781 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content57% 
IMG OID639780136 
Productcarboxypeptidase Taq 
Protein accessionYP_926679 
Protein GI119773939 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2317] Zn-dependent carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAA GTTACCTAAA GCTCAAGGGC CATTTTGCCC AGATTTCCCA CTTTGAACAT 
TTCAGCGCTC TGGGCGACTG GGATCAGGCC ACCATGATGC CCATGGGCGG CAGCGAAGGC
CGCAGCGATG CCATGGCAAC ACTGGCAGGT CATATCCATG GGCTTCGCAC TGCCCCCTGG
TTGCTGGACG AAATCAATAA TGCCGAGTCT GAGCCCCTCA CAGCTCGGGA GCGCGCCAAC
CTGCGGGAGA TGAAATACCA GTGCCAGCAG TCAATCGCCG TACCCCAGGC GTTGGTCGAA
GCCAAGACCA AGGCCGCCTA TCAGTGCGAA AATGCCTGGC GCGAGCAGCG TAAAAACAAT
GACTGGTCAG GCTTTAAACC CAATCTCGAA AACGTGATGG CGCTGGTACG GGAAGAAGCC
GGTCACCGCG CAGCGCTCAC TGGGCTCTCA CCCTACGATA CCTTGCTGGA TAAATTTGAA
CCCGGCATGA GAGCCGCCAC ACTTGAAACC ACCTTCGCCG GTCTTCGCAG CACGCTTCCC
AGTCTTATCC AGCAGATCCT CAACAAACAG GCCAGCGAAC CGGTTATCCA ACTCGACGGG
ACTTTCGACA TAGGCGCCCA GGAGAAGATT GGCCGTGAAC TCATGACACT GCTGGGGTTT
GACTTCAATC AGGGGCGTCT GGATGTGTCC AGCCACCCCT TCTGCGGTGG AGTGCCGGGC
GACGTGCGAC TCACCACCCG CTACAGGGAA GATGACTTTA CCGGCGCCCT GCTTGGCATC
ATCCACGAAA CCGGCCATGC CCGCTATGAA CAGGGCCTGC CATTGGCGCT TCGGGGCCAA
CCGGCCGGGC TTGCTCGCTC CATGGGTATC CATGAGAGCC AGAGTCTGTT TTTTGAAATG
CAGCTGGCTG CCAGCAAACC TTTTATCGAG CTCATCACCC CCATCATAAA CCGTAATCTT
GGGCGGGATT TCAGCGCCGA TGCTCTGGTT AACCTCTATA CCCGGGTTAA GCCGGGTCTC
ATCCGGGTTG ATGCCGACGA AGTCACCTAC CCTTGCCATA TCCTGCTTCG ATTCGACGCC
GAAAAGGCAT TGATGGACGG CTCACTTACG GTGGCCGACT TGCCCGACTT CTGGTCAGCG
GGCATGCAGG AACTGCTGGG GATTAATACC GATGGCGACT ACCGAAATGG CTGCATGCAG
GACATACACT GGACTCTGGG TGAACTCGGG TATTTCCCGA GCTACACCCT GGGGGCCATG
TATGCCGCAC AGCTGCGCTT TGCCATGGAA AAAACTCTGG GGCCACTGGA GCAAACCATT
GGCCAGGGGC GCCTCGCCGA GGTTTTTGCC TGGCTTGAGC AACATATCTG GTCACTGGGT
TCACTCATGG ATACCGACAG CCTGATTAAG GCTGCCACCG GTGAATCACT CAACTTCCAC
TATCTTGAGC AGCACCTGCG TCAACGCTAT CTGGGCGAAT AA
 
Protein sequence
MTTSYLKLKG HFAQISHFEH FSALGDWDQA TMMPMGGSEG RSDAMATLAG HIHGLRTAPW 
LLDEINNAES EPLTARERAN LREMKYQCQQ SIAVPQALVE AKTKAAYQCE NAWREQRKNN
DWSGFKPNLE NVMALVREEA GHRAALTGLS PYDTLLDKFE PGMRAATLET TFAGLRSTLP
SLIQQILNKQ ASEPVIQLDG TFDIGAQEKI GRELMTLLGF DFNQGRLDVS SHPFCGGVPG
DVRLTTRYRE DDFTGALLGI IHETGHARYE QGLPLALRGQ PAGLARSMGI HESQSLFFEM
QLAASKPFIE LITPIINRNL GRDFSADALV NLYTRVKPGL IRVDADEVTY PCHILLRFDA
EKALMDGSLT VADLPDFWSA GMQELLGINT DGDYRNGCMQ DIHWTLGELG YFPSYTLGAM
YAAQLRFAME KTLGPLEQTI GQGRLAEVFA WLEQHIWSLG SLMDTDSLIK AATGESLNFH
YLEQHLRQRY LGE