Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0796 |
Symbol | |
ID | 4603048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 981287 |
End bp | 982396 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639780130 |
Product | hypothetical protein |
Protein accession | YP_926673 |
Protein GI | 119773933 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.211721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGTAT TTAGATATCT TTTCAAAGAA GTTTTCAAGG CACAAATCGC GGTACTTTTG GTGCTGTTGA CTGTTTTTAT CAGCCAGCAT TTTGTCCGTG TACTTGCCGA CGCGTCGGAC GGTGAGTTTC CCGCCTCTTT AGTCGTTACC CTGCTTGGGT TGAATCTCCC CTATCTGGCT GTGCTTGTGC TGCCCCTGAG CTTGTTTCTT GGCATTTTGA TGGCCCATGG GCGTATGTAC GCCGAAAACG AGATGGTAGT GTTCCACGGG GTCGGGGTCA GTGAATGGTA TGTCACCAGG GTCACCCTCT TGCTCGCTGT GCTTAATATG CTGTTTACCG GCTACTTGTC TCTGTTTGTG ACCCCTTGGG CGGAAGAGCG CCAAAATCAG GTACTGGAAA AGGCCCAGTC TGAGGCCGGT CTGGCAGCTC TGGTGCAGGG CCGTTTTCAA ACCAGCCCCG ATGGCCGCGC CGTACTCTTT GTGGAAAAAA TTGGCAAAGA CAACGAGCTG GAAAAAGTGT TTGTGGCCCA GTTGCCTGAC CCCGACGACG AACATGGCCA GATAAATCTG GTATCTGCCG CCGGAGGCAA GGTGGTGGAA GATGCCAGTG GCGCTCAGCA GCTTAAGTTG AACGACGGCG TGCGCTACCA GGGTTCGCCC AAGAGCCTGG ATTATCAGGT GCTTGAATTT GGCGGCTATG GCATGCAAAT CAAGGAGCAG GAGGTCGACG AGCGCAGACG CAAGATGTCG GCATTGCCGC TTAACCAGTT GCTGGATCAG AATACCCCCG AAGCAGTGGC GGAACTCCAC TGGCGTATCG CTATCCCCCT TGCCATCCCT TTGATGACCC TGATTGCTGT GCCCATGGCA AGGGTCAATG TGCGTCAGGG CAAGTTTGCC AAGATGCTGC CGGCAATCCT CTTGTATCTC GGTTACTTCG GCCTGATGGT AGCCGGGCGC AAGGCGCTGG AAGATGAAGT GGTTCCTGCG TTTATGGGTA TGTGGTGGAT ACACCTGTCG GCCCTCGTCA TGGGCATAAT GCTGCTGGGT AAAGAGCGGC CGCTGGGGGC GAAACTCAGT GGCAGGTTCA AGCGGAGGGC CGCAGCATGA
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Protein sequence | MIVFRYLFKE VFKAQIAVLL VLLTVFISQH FVRVLADASD GEFPASLVVT LLGLNLPYLA VLVLPLSLFL GILMAHGRMY AENEMVVFHG VGVSEWYVTR VTLLLAVLNM LFTGYLSLFV TPWAEERQNQ VLEKAQSEAG LAALVQGRFQ TSPDGRAVLF VEKIGKDNEL EKVFVAQLPD PDDEHGQINL VSAAGGKVVE DASGAQQLKL NDGVRYQGSP KSLDYQVLEF GGYGMQIKEQ EVDERRRKMS ALPLNQLLDQ NTPEAVAELH WRIAIPLAIP LMTLIAVPMA RVNVRQGKFA KMLPAILLYL GYFGLMVAGR KALEDEVVPA FMGMWWIHLS ALVMGIMLLG KERPLGAKLS GRFKRRAAA
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