| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0792 |
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| Symbol | |
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| ID | 4603044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 976548 |
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| End bp | 977186 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780126 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_926669 |
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| Protein GI | 119773929 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTGGAC ACGACAAGGT GCAAACACCA AAACGAAATC GCAGCGAAAT CAAGCGTGAA
GCCATAATGC TCGCCGCCAA GGAACTGTTT CAGACCCAGG GCGTACAGGG CACCAGCATG
GATGAGCTGG CGCGGGTGGC TGAGGTTTCC AAGCGCACCG TGTATAACCA CTTCGCCAGC
AAAGAGGCGC TGGTACTGGA GCTGGTTGCC GAACTGTGGC AATCGGCCAA TGCCGATATC
AAGGTATGTT TTGTCAAAGA CCACCCCGTG CATCCTCAGC TCCTTGAGGT ACTTAACGCC
GAAATCGCCA TCATGACCAA CCCGGATTAT CTCGAACTGG TGCGGGTCGC CATTGGCCAC
TTTATGTTTC ATCCCGGTGC GCTTAAATGT GAGCTGGAAA GCCGGGTCAC CCACGAGTCG
GCGCTGCGCC GCTGGCTGTC TGAAGGCATT AAATCAGGCG CCCTGCCCAA TCTGGATGTG
GATGAAGTGG AATGTACGCT GCACGGCATG ATTAAGGGCG TGTGTTTTTG GCCGTCGCTG
ATGCAGCTGT GCGAACCCCT TCCCAAGGGT GAGCTTGAGC GCCTTGGTGC CGATATCGCC
GCCTTTTTTG AGTTCAAATA CTTAAGCGGC CGCAACTAA
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| Protein sequence | MSGHDKVQTP KRNRSEIKRE AIMLAAKELF QTQGVQGTSM DELARVAEVS KRTVYNHFAS
KEALVLELVA ELWQSANADI KVCFVKDHPV HPQLLEVLNA EIAIMTNPDY LELVRVAIGH
FMFHPGALKC ELESRVTHES ALRRWLSEGI KSGALPNLDV DEVECTLHGM IKGVCFWPSL
MQLCEPLPKG ELERLGADIA AFFEFKYLSG RN
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