| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0789 |
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| Symbol | |
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| ID | 4603041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 971562 |
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| End bp | 972980 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639780123 |
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| Product | aspartate ammonia-lyase |
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| Protein accession | YP_926666 |
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| Protein GI | 119773926 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1027] Aspartate ammonia-lyase |
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| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACAC GTATTGAACA CGACCTGCTG GGGGATGCCC CGGTTCCTGC CCAAGCCTGG
TATGGCATTC AAACCCAGAG AGCGCTGGAA AACTTCAGCC TGAGCGGTAC CCCAATCAAT
GCTTTCCCTG AGCTTATCAG GGCGCTGGCC AAGGTTAAGG CCGCTGCCGC CCGCGCCAAC
CAGAGTCTCG GGCAGCTGTC TGACATCAAA GCCAACGCCA TTGCCGCCGC CTGCGACGAT
ATTGTTCAGG GCGCACTGCA CGACCAGTTT GTGGTGGATC TCATTCAGGG GGGCGCTGGC
ACCTCCACCA ACATGAACGC CAACGAAGTG ATTGCCAACC TGGCGCTTGC CAAGCTTGGC
CATGGCAAGG GAGAGTACCG CCATCTGCAC CCCAACAATG ATGTGAACTG CTCACAGTCC
ACCAACGATG CCTACCCGAC GGCGGCGCGT CTGGCCATGG TGGAGGCGAC AGCCCCACTC
AAGGTGGCTA TCGAGGCCAT TTGCTTAAGC CTTGAGGTCA AGGGCCGGGA GTTTAGCCAT
ATCCTCAAGA TGGGCCGCAC CCAGCTGCAG GATGCGGTGC CCATGACCCT GGGGCAAGAG
TTCGATGCTT TTGCCTCCAG CCTTAAATCG GACATAGGCC GCATCGATGA TGCCTGCAAG
GAGCTTTGCG TGGTGAACCT TGGCGGCACC GCCATTGGCA CCGGTATTAA CACCCATCCG
GCCTATGGCG TGTTGGCAGT AAAGGCCCTT GCCGACATTA CTGGACTGCC GGTGACTCAG
GCTGACAATC TAATCGATGC CACCACCGAT ATGGGCGCCT TTGTGACGCT GTCATCTGTG
CTTAAGCGCC TGGCGGTGAA GCTGTCCAAG CTCAGTAATG ACCTGCGGTT GCTCTCCAGC
GGTCCACGCA CCGGTCTTGG GGAAATTCGT TTGCCTGCGA TGCAGCCGGG ATCCTCCATC
ATGCCGGGCA AGGTGAATCC GGTTATCCCT GAGGCGGTGA ATCAGGTGGC GTTTCAGGTG
ATTGGCACCG ACATGACCAT CACCATGGCC GCCGAGGCGG CGCAGCTGCA ACTGAATGCC
ATGGAACCGG TGATTGTTTA TAACCTTTTG AATAACTGCG CCTTGCTGAC CCGTGCCATT
GCCATGCTCG ACAGCCGCTG TATTCAGGGC ATCGAAGCCA ACGAAGCCAA ATGCGAGCAG
CATGTGAGCA GCAGTATCGG CATAGTCACG GCGTTGGTGC CCCACATCGG CTACGAGAAC
GCCACCCGTA TCGCGGGTGA AGCGCTGCTG AGTGGCGCCG GTGTGGCCGA GCTTGTGCGC
CGCGATGGGC TGCTTAGCGA TGATGCCTTA AGCCAAATCT TAAGTCCGGC CGCCATGGTG
ACGCCGGTGG AGCTGACTGG TGCCGCCAAG GCGCATTGA
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| Protein sequence | MDTRIEHDLL GDAPVPAQAW YGIQTQRALE NFSLSGTPIN AFPELIRALA KVKAAAARAN
QSLGQLSDIK ANAIAAACDD IVQGALHDQF VVDLIQGGAG TSTNMNANEV IANLALAKLG
HGKGEYRHLH PNNDVNCSQS TNDAYPTAAR LAMVEATAPL KVAIEAICLS LEVKGREFSH
ILKMGRTQLQ DAVPMTLGQE FDAFASSLKS DIGRIDDACK ELCVVNLGGT AIGTGINTHP
AYGVLAVKAL ADITGLPVTQ ADNLIDATTD MGAFVTLSSV LKRLAVKLSK LSNDLRLLSS
GPRTGLGEIR LPAMQPGSSI MPGKVNPVIP EAVNQVAFQV IGTDMTITMA AEAAQLQLNA
MEPVIVYNLL NNCALLTRAI AMLDSRCIQG IEANEAKCEQ HVSSSIGIVT ALVPHIGYEN
ATRIAGEALL SGAGVAELVR RDGLLSDDAL SQILSPAAMV TPVELTGAAK AH
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