Gene Sama_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0786 
Symbol 
ID4603038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp968560 
End bp969069 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content53% 
IMG OID639780120 
Productacetyltransferase 
Protein accessionYP_926663 
Protein GI119773923 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC TGATGAGTGA AAGACTAACT CTCATTCCAA TAGACACCAG CGACAGAGCG 
CTTGTGGTGG CGCTCAATAC TGATGCACAG GTAATGACCT TTGTCGCCAA GCCCCAGTCT
GTGGAGGCGG CCAACAGGAT ATTCGATATC ATACTGCGAC AAACTCAGGC ACAGCCGCCA
AAAATGTACT GCTGGAAAAT CACCACGGCG GCACAGGCGA CCACGGTGGG GGTGATATCC
CTGACCCGCA TGAAAGGGGA ATATCTGGGA TGGCTGGAAA TCGGTGCCCT CAGCCTGCCA
GCATTTTACG GCAAGGGATA CATCCCCGAA GCCATGGAGC TCGTCTGCGC CGATGCTCTG
GAGTGTGACG AAATCAAAGG CATATACGCA AAGTTTCAGG CCGAACATCA GGCATCCTTG
CGTATTACCC GCAAAACCCA CTTCAGCACA CCACAACCCT CGGCTGATTT TCCCGGTTAT
CTTGAGTGCA CCAGACGCAA AACTCGGTAA
 
Protein sequence
MKQLMSERLT LIPIDTSDRA LVVALNTDAQ VMTFVAKPQS VEAANRIFDI ILRQTQAQPP 
KMYCWKITTA AQATTVGVIS LTRMKGEYLG WLEIGALSLP AFYGKGYIPE AMELVCADAL
ECDEIKGIYA KFQAEHQASL RITRKTHFST PQPSADFPGY LECTRRKTR