| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0780 |
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| Symbol | |
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| ID | 4603032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 962633 |
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| End bp | 963076 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780114 |
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| Product | TraR/DksA family transcriptional regulator |
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| Protein accession | YP_926657 |
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| Protein GI | 119773917 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1734] DnaK suppressor protein |
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| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00166659 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAG GCACTAAAAA ACTTGGCGTA CTCGCTATCG CAGGTGTAGC GCCTTACCAG
GAGCAACCTG GTGAGGAGTA TATGAACGAC CAGCAGTTGG GCCATTTCAA GAAGATCCTT
GAAGCCTGGC GCAACCAGCT GCGTGAAGAA GTCGACCGCA CCCTTTCGCA CATGCAAGAC
GAAGCCGCCA ATTTCCCCGA TCCAGTCGAC AGAGCCGCTC AGGAAGAGGA GTTCAGTCTG
GAGCTTCGTG CCCGCGACAG AGAACGTAAA CTGATCAAGA AGATTGAAAA GACGCTGCAG
AGAATCGAAG ATGATGACTT TGGTTTCTGC GACTCTTGCG GCGTGGAAAT CGGCATTCGC
CGTCTCGAAG CCCGCCCAAC AGCCGATCTC TGCATCGACT GTAAAACGCT GGCAGAGATC
AAAGAAAGGC AGATGGCTGG TTAA
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| Protein sequence | MPEGTKKLGV LAIAGVAPYQ EQPGEEYMND QQLGHFKKIL EAWRNQLREE VDRTLSHMQD
EAANFPDPVD RAAQEEEFSL ELRARDRERK LIKKIEKTLQ RIEDDDFGFC DSCGVEIGIR
RLEARPTADL CIDCKTLAEI KERQMAG
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