Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0771 |
Symbol | |
ID | 4603023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 954860 |
End bp | 955390 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639780105 |
Product | hypoxanthine phosphoribosyltransferase |
Protein accession | YP_926648 |
Protein GI | 119773908 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACA CCATCGAAGA GATGATCTCG GCCGCCGAGA TTGACCAGAA ACTCAATGAA CTGGCCGAGC GTATCAACGC CCACTATGAA AACAGCGAAC GACTGCTGAT GGTAGGCTTG CTCAAGGGAT CCGCGGTCTT TATGGCTGAC CTGTGTCGCC GTATCAAAGG CCATGTGGAA ATCGACTTTA TGTGCGTTTC CAGCTATGGC AATGCCATGT CCAGTTCCCG CGATGTGAAG ATCCTCAAAG ACGTGCAGTC AGATATCGCC GATCGTGATG TGCTTATCGT TGAAGATCTT ATTGATTCGG GCAACACCCT GTCCAAGGTG CGCGAACTGC TGCTGGTGCG TGAGCCAAAG AGCCTGGCCC TGTGCACCCT GCTGGATAAG CCGGAGCGCC GTGAAGTAAA TGTGCATGTG GACTTTGTCG GCTTTACCAT TCCAGACGAG TTCATCGTTG GCTACGGTAT CGACTATGCC GAGAAGTACC GTAACCTGCC TTATATCGCC AAGGTGATCC CGCAGGAATA A
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Protein sequence | MKHTIEEMIS AAEIDQKLNE LAERINAHYE NSERLLMVGL LKGSAVFMAD LCRRIKGHVE IDFMCVSSYG NAMSSSRDVK ILKDVQSDIA DRDVLIVEDL IDSGNTLSKV RELLLVREPK SLALCTLLDK PERREVNVHV DFVGFTIPDE FIVGYGIDYA EKYRNLPYIA KVIPQE
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