| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0763 |
|---|
| Symbol | |
|---|
| ID | 4603015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 946177 |
|---|
| End bp | 946959 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639780097 |
|---|
| Product | cobalamin 5'-phosphate synthase |
|---|
| Protein accession | YP_926640 |
|---|
| Protein GI | 119773900 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0368] Cobalamin-5-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACCT TTAAGCGTGA ACTTGAGTTG TTTTTGTTGG CGCTCACCTT TTTTACCCGC
ATTCCTGTGC CGGTAAAACT CGATTACAGC GGCGAAGGGT TAAACCGTGC CAGTCGTTAC
TTTGGCCTGG TGGGCACTCT GGTGGGGTTG ATTGCTGCCC TGGTGTTTTA CCTGACCCAG
TTTATCTTTC CTGCCTCGGT GGCCGTGGTG CTGGCCATGA TTGCCACCGT CTTGCTCACC
GGCGGTTTCC ATGAAGATGG CCTTGCCGAT ACCGCAGACG GATTTGGCGG TGCCTTCGAG
CGGGAACGTA AGCTCGAAAT CATGAAAGAC AGCCGGGTCG GTTCCTATGG TTCACTGGCG
CTGATGTTGG CGTTGCTGCT GAAGTTTCAG CTGTTAAGCG AACTGGCACT CTATTCAGTT
TCAAGTGTTG CCGGTGGCCT GGTGTTGGGG CATACCTTAA GCCGTGCCTT CGCCGCCAGT
ATCATTTTCA ACCATACCTA TGTGCGAGAA GATGCAGAGA GCAAAGCCAA GCCGCTGGCT
CAGTCGATGC ACTGGGATGA AGTGCTGTTT TTAGTGCTCA GCGCCGGGGT GATTTGCCTG
CTGCTCACCG GTGTGGGCGC AACCCTGGTG ATACTCGTTA CCCTCTTTGT GGCCCGCAGC
CTGCTTGCCC GTTGGCAGTC ACGCCATATC GGCGGCTATA CGGGCGACAC GCTTGGTGCC
TGTCAGCAGA TTCTCGAACT GGTGGTCTAT CTGGTGCTCT TACTGCTCTG GAGCCAGTCA
TGA
|
|---|
| Protein sequence | MSTFKRELEL FLLALTFFTR IPVPVKLDYS GEGLNRASRY FGLVGTLVGL IAALVFYLTQ
FIFPASVAVV LAMIATVLLT GGFHEDGLAD TADGFGGAFE RERKLEIMKD SRVGSYGSLA
LMLALLLKFQ LLSELALYSV SSVAGGLVLG HTLSRAFAAS IIFNHTYVRE DAESKAKPLA
QSMHWDEVLF LVLSAGVICL LLTGVGATLV ILVTLFVARS LLARWQSRHI GGYTGDTLGA
CQQILELVVY LVLLLLWSQS
|
|---|
| |