| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0762 |
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| Symbol | cobT |
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| ID | 4603014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 945129 |
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| End bp | 946163 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639780096 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_926639 |
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| Protein GI | 119773899 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATA TAGCTCCCGT CAGCCGCGAA CGGGATGAGC AAATCCAGGC GTGCATCGAC
GATAAAACCA AGCCAAGAGG TGCACTTGGG GCGCTGGAGC CTCTGGCGGC GCACCTGGCA
AGGCTTTTGG GTGAGGCGCC GGAAATTGGC CGGCCTGCCA TGTTGGTATT TGCCGCCGAC
CACGGTATTG CCAGTGCCGG TGTATCCATT GCACCGCCGG AGGTAACCGG CCAGATGGTG
GCCAACTTTG CCGCCGGGGG CGCCGCCATC AATGTGTTTT GCCGCCAGCT CGGTTGGCAG
CTTGAAATCA TCGACGCCGG TATGCTCAGC GCACCGCCAA GGGAAATGGG CGTGACAGAT
TGTCGCCTCG GCGCAGGCAC GGGCCCCATT CACAAGCGCG CCGCCATGAC CCTTGGACAG
GTTGAGCATG GCTTGGCCTT TGGCCGTGAA AGGGTGCGCT CGCACCACGC CGAAGGCACC
AATCTCATCG GACTGGGGGA AATGGGAATA GGCAATACCT CGAGCGCCGC AGCAGTGATG
GCAGCCTTGA TGGGGCTTGA AGCCAAAGAC TGTGTTGGCC GCGGTACCGG CGTGGACGCG
GCCACACTTA AGCGCAAGCA GATGCTGGTG GAGCAGGCGC TCTTGTTGCA CCTGGATATG
CTCACCAGCC CGGAGTCTGT CCTTGCCTGT GTGGGCGGCT TTGAAATAGT CGAGATGACC
GGCGCCATCC TCGGAGCGGC TGAGCTGGGG ATCCCCGTGT TGGTGGACGG CTTTATTGCC
ACCACGGCCG CACTCGCAGC GGTGAAGATG TTCCCCCAAA GCCGTGAATA TCTTATCTTT
GCTCATCGCT CGGCAGAGCG TGCCCATGGG CTGATGCTGG CGCATATGGA GGCTGAGCCG
TTACTGAGCC TGGATATGCG TCTCGGTGAA GGTACAGGGG CGGCATTGGC CTTGCCACTG
GTGCAGGCAG CGGCCAATTT TTATCGTGAG ATGGCGAGCT TCAGCGACGC CGGAATTACA
GATGTAACGC CTTAG
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| Protein sequence | MFDIAPVSRE RDEQIQACID DKTKPRGALG ALEPLAAHLA RLLGEAPEIG RPAMLVFAAD
HGIASAGVSI APPEVTGQMV ANFAAGGAAI NVFCRQLGWQ LEIIDAGMLS APPREMGVTD
CRLGAGTGPI HKRAAMTLGQ VEHGLAFGRE RVRSHHAEGT NLIGLGEMGI GNTSSAAAVM
AALMGLEAKD CVGRGTGVDA ATLKRKQMLV EQALLLHLDM LTSPESVLAC VGGFEIVEMT
GAILGAAELG IPVLVDGFIA TTAALAAVKM FPQSREYLIF AHRSAERAHG LMLAHMEAEP
LLSLDMRLGE GTGAALALPL VQAAANFYRE MASFSDAGIT DVTP
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