Gene Sama_0755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0755 
Symbol 
ID4603008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp933520 
End bp935586 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content56% 
IMG OID639780090 
Productpeptidase, putative 
Protein accessionYP_926633 
Protein GI119773893 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA TCCATTTAAT AACAGCGCTC TGTCTGTTGC CGCTGCTGTC ACACGCGGCT 
GACGACACAA GCACAACTGC AACCAACACA GCTGCAAGCA CCTCAGAGCG GCTGCTCAGC
GTCGAGCGCC TGTGGCAGCT TGAGCGAGTC GGCTCACCCG TGGTGTCGCC AAATGGCCAG
TACATCATAG CGCCTGTCAC CCGCTTCGAT GTCAAAGAAG ACAAGGGTTA CACCCGTCTG
TGGCTGTTTG ACCGCGACGG CAAAAAGCAG CGCCCCATCA CCGCCGAAGG TCTGGGTGCC
AGTGAGCCTG TATTCTCCCC CGACAGCAGC ACCCTCGCTT TTGTCAGTAA GCGCGATAAG
GACGACGCCG GTCAGATTTA CCTGCTGCCG ATGACAGGTC CGGGCGAAGC CCAGCGCCTG
ACCGAGGTAC CCACAGGTGT GTATGGCATT AAATGGGTCG GCAAGCACCT CTACTTTATT
GCCAATGTGT GGCCGCAAAA GAGCTGGGAT GAGATGGCCG AGCAAATCAA GGCCGACAAA
GACAAGAAGC TGTCTGCCCG TCAGTGGAAT GCTCTGCCCT ATTCCCAGTT CGATCATTGG
TTGGACGAAG ACCGTCAGGC CCATGTGTTC CGCATTGCCG CCAGCGGCGG CGCTGTCGAA
GCGATCACCC AACCCCTTGG CCGCGAGCTG CCGCGCTCCA GCCAAAGTTC AGCTGACTAC
GATATCGATG CCAACGAGCA GTACATCGCA TTCACCTCCA ACGGCTGGGA CAATCAGGTT
GACCCCAACA TCGACCTCTT CCTCGCCCGC ATCGGCGGTA ATCAGGCCGA CAACCTGACG
CCGGACAACA AGGCGCCGGA TGACAGCCCA AGCTTCAGCC CCGATGGCGA TACCCTCGCC
TTCAGCCGCC AGCATATTCA GGGCTTTTAT GCCGATACGG CGCGACTGAT GCTGTATGAC
ATGGACAGTA AAAAGCTTCA ATCCCTGACC GATGGCTGGG ATCGCTCGCT GGGCAGTTTC
GTCTGGAGCA AGGATGGCAA GAGCCTGTTC AGCAATATCG ATGACGCCGC CACCCAGCGC
CTGTATCAAA TCGATGCCAA AACCGGCAAG CCAAGGGCCA TCACCAAGGC CACCAGCTTT
GGCGCCCCGG CCGTTGCCGA CAAAAGCACC CTGGTTGCCA CCAACGACAG CTTCCTTTAT
CCATCACGCC TTGTGACTGT GGATGTAAAG AGCGGCAAAA CCACCCGTCT GGATAAGTTT
AACGACGACC TGCTGAGTCA AACCGACCTT GGCCATTACG AGTCCGTGAC TTACAAAGGT
GCAGACGGCA AAGACATCCA GATGTGGATT CATTACCCTC CGGGCTTTGA CAAGAGCAAG
AAATACCCAC TGTTCCTGCT TATTCATGGC GGGCCGCACA ATGCCATTGG CGACTCTTTC
AGCTACCGCT GGAACGCCCA GACCTTCTCC TCATGGGGTT ATGTAACCGC CTGGCCAAAC
TTCCACGGCT CCAGCGGTTT TGGACAGGAG TTTGCGGATG CCATTAACCC CGACTGGCGT
ACCAAACCGC TGGCAGATAT TCAGGCCGCA ACCCAATACT TTGAGGCCCA GCCCTGGATT
GACACCGAGC GCATGGTGGC CGGTGGTGCG AGCTACGGCG GTTACCTGAC CTCGGTCCTC
TTGGGCACAG AGCATCCGTT CAAGGCGCTG CTCATTCATG CAGCCGTGTA CAACATGTAC
TCGCAAATGG CGGCCGACTT TGCCGTGCAC AGCACTCGCT TCGGTGGCTT TTGGGAAAAT
CCAGAGATCT ATAAAACCAT CTCACCCCAC TATCACGCCG ATAAGTTCAA AACCCCAACT
TTGGTGATCC ACGGTCAACT GGACTACCGC GTGCCTGTGG GTCAGGGCTT TGAGCTGTTC
CGCACCCTGC AAACCAAGGG GATAGAATCA AGGATGATTT ACTTCCCCGA CGAGAACCAC
TGGATCTTAA AGCCCAATAA CTCCATTTAT TGGTACAACG AGGTTAAAGA CTGGATGACC
CGCTTCGCTG AACCTGGCGC ACGCTGA
 
Protein sequence
MNKIHLITAL CLLPLLSHAA DDTSTTATNT AASTSERLLS VERLWQLERV GSPVVSPNGQ 
YIIAPVTRFD VKEDKGYTRL WLFDRDGKKQ RPITAEGLGA SEPVFSPDSS TLAFVSKRDK
DDAGQIYLLP MTGPGEAQRL TEVPTGVYGI KWVGKHLYFI ANVWPQKSWD EMAEQIKADK
DKKLSARQWN ALPYSQFDHW LDEDRQAHVF RIAASGGAVE AITQPLGREL PRSSQSSADY
DIDANEQYIA FTSNGWDNQV DPNIDLFLAR IGGNQADNLT PDNKAPDDSP SFSPDGDTLA
FSRQHIQGFY ADTARLMLYD MDSKKLQSLT DGWDRSLGSF VWSKDGKSLF SNIDDAATQR
LYQIDAKTGK PRAITKATSF GAPAVADKST LVATNDSFLY PSRLVTVDVK SGKTTRLDKF
NDDLLSQTDL GHYESVTYKG ADGKDIQMWI HYPPGFDKSK KYPLFLLIHG GPHNAIGDSF
SYRWNAQTFS SWGYVTAWPN FHGSSGFGQE FADAINPDWR TKPLADIQAA TQYFEAQPWI
DTERMVAGGA SYGGYLTSVL LGTEHPFKAL LIHAAVYNMY SQMAADFAVH STRFGGFWEN
PEIYKTISPH YHADKFKTPT LVIHGQLDYR VPVGQGFELF RTLQTKGIES RMIYFPDENH
WILKPNNSIY WYNEVKDWMT RFAEPGAR