Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0755 |
Symbol | |
ID | 4603008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 933520 |
End bp | 935586 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639780090 |
Product | peptidase, putative |
Protein accession | YP_926633 |
Protein GI | 119773893 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA TCCATTTAAT AACAGCGCTC TGTCTGTTGC CGCTGCTGTC ACACGCGGCT GACGACACAA GCACAACTGC AACCAACACA GCTGCAAGCA CCTCAGAGCG GCTGCTCAGC GTCGAGCGCC TGTGGCAGCT TGAGCGAGTC GGCTCACCCG TGGTGTCGCC AAATGGCCAG TACATCATAG CGCCTGTCAC CCGCTTCGAT GTCAAAGAAG ACAAGGGTTA CACCCGTCTG TGGCTGTTTG ACCGCGACGG CAAAAAGCAG CGCCCCATCA CCGCCGAAGG TCTGGGTGCC AGTGAGCCTG TATTCTCCCC CGACAGCAGC ACCCTCGCTT TTGTCAGTAA GCGCGATAAG GACGACGCCG GTCAGATTTA CCTGCTGCCG ATGACAGGTC CGGGCGAAGC CCAGCGCCTG ACCGAGGTAC CCACAGGTGT GTATGGCATT AAATGGGTCG GCAAGCACCT CTACTTTATT GCCAATGTGT GGCCGCAAAA GAGCTGGGAT GAGATGGCCG AGCAAATCAA GGCCGACAAA GACAAGAAGC TGTCTGCCCG TCAGTGGAAT GCTCTGCCCT ATTCCCAGTT CGATCATTGG TTGGACGAAG ACCGTCAGGC CCATGTGTTC CGCATTGCCG CCAGCGGCGG CGCTGTCGAA GCGATCACCC AACCCCTTGG CCGCGAGCTG CCGCGCTCCA GCCAAAGTTC AGCTGACTAC GATATCGATG CCAACGAGCA GTACATCGCA TTCACCTCCA ACGGCTGGGA CAATCAGGTT GACCCCAACA TCGACCTCTT CCTCGCCCGC ATCGGCGGTA ATCAGGCCGA CAACCTGACG CCGGACAACA AGGCGCCGGA TGACAGCCCA AGCTTCAGCC CCGATGGCGA TACCCTCGCC TTCAGCCGCC AGCATATTCA GGGCTTTTAT GCCGATACGG CGCGACTGAT GCTGTATGAC ATGGACAGTA AAAAGCTTCA ATCCCTGACC GATGGCTGGG ATCGCTCGCT GGGCAGTTTC GTCTGGAGCA AGGATGGCAA GAGCCTGTTC AGCAATATCG ATGACGCCGC CACCCAGCGC CTGTATCAAA TCGATGCCAA AACCGGCAAG CCAAGGGCCA TCACCAAGGC CACCAGCTTT GGCGCCCCGG CCGTTGCCGA CAAAAGCACC CTGGTTGCCA CCAACGACAG CTTCCTTTAT CCATCACGCC TTGTGACTGT GGATGTAAAG AGCGGCAAAA CCACCCGTCT GGATAAGTTT AACGACGACC TGCTGAGTCA AACCGACCTT GGCCATTACG AGTCCGTGAC TTACAAAGGT GCAGACGGCA AAGACATCCA GATGTGGATT CATTACCCTC CGGGCTTTGA CAAGAGCAAG AAATACCCAC TGTTCCTGCT TATTCATGGC GGGCCGCACA ATGCCATTGG CGACTCTTTC AGCTACCGCT GGAACGCCCA GACCTTCTCC TCATGGGGTT ATGTAACCGC CTGGCCAAAC TTCCACGGCT CCAGCGGTTT TGGACAGGAG TTTGCGGATG CCATTAACCC CGACTGGCGT ACCAAACCGC TGGCAGATAT TCAGGCCGCA ACCCAATACT TTGAGGCCCA GCCCTGGATT GACACCGAGC GCATGGTGGC CGGTGGTGCG AGCTACGGCG GTTACCTGAC CTCGGTCCTC TTGGGCACAG AGCATCCGTT CAAGGCGCTG CTCATTCATG CAGCCGTGTA CAACATGTAC TCGCAAATGG CGGCCGACTT TGCCGTGCAC AGCACTCGCT TCGGTGGCTT TTGGGAAAAT CCAGAGATCT ATAAAACCAT CTCACCCCAC TATCACGCCG ATAAGTTCAA AACCCCAACT TTGGTGATCC ACGGTCAACT GGACTACCGC GTGCCTGTGG GTCAGGGCTT TGAGCTGTTC CGCACCCTGC AAACCAAGGG GATAGAATCA AGGATGATTT ACTTCCCCGA CGAGAACCAC TGGATCTTAA AGCCCAATAA CTCCATTTAT TGGTACAACG AGGTTAAAGA CTGGATGACC CGCTTCGCTG AACCTGGCGC ACGCTGA
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Protein sequence | MNKIHLITAL CLLPLLSHAA DDTSTTATNT AASTSERLLS VERLWQLERV GSPVVSPNGQ YIIAPVTRFD VKEDKGYTRL WLFDRDGKKQ RPITAEGLGA SEPVFSPDSS TLAFVSKRDK DDAGQIYLLP MTGPGEAQRL TEVPTGVYGI KWVGKHLYFI ANVWPQKSWD EMAEQIKADK DKKLSARQWN ALPYSQFDHW LDEDRQAHVF RIAASGGAVE AITQPLGREL PRSSQSSADY DIDANEQYIA FTSNGWDNQV DPNIDLFLAR IGGNQADNLT PDNKAPDDSP SFSPDGDTLA FSRQHIQGFY ADTARLMLYD MDSKKLQSLT DGWDRSLGSF VWSKDGKSLF SNIDDAATQR LYQIDAKTGK PRAITKATSF GAPAVADKST LVATNDSFLY PSRLVTVDVK SGKTTRLDKF NDDLLSQTDL GHYESVTYKG ADGKDIQMWI HYPPGFDKSK KYPLFLLIHG GPHNAIGDSF SYRWNAQTFS SWGYVTAWPN FHGSSGFGQE FADAINPDWR TKPLADIQAA TQYFEAQPWI DTERMVAGGA SYGGYLTSVL LGTEHPFKAL LIHAAVYNMY SQMAADFAVH STRFGGFWEN PEIYKTISPH YHADKFKTPT LVIHGQLDYR VPVGQGFELF RTLQTKGIES RMIYFPDENH WILKPNNSIY WYNEVKDWMT RFAEPGAR
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