| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0741 |
|---|
| Symbol | |
|---|
| ID | 4602994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 908537 |
|---|
| End bp | 909067 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639780076 |
|---|
| Product | hemolysin-coregulated protein (uncharacterized)-like protein |
|---|
| Protein accession | YP_926619 |
|---|
| Protein GI | 119773879 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTCA GTCAATGGAA GCGACTTGGT ATGCTATCGG CCCTGGCACT GGGAATGACG
GTGGGTTCGG CTCAGGGGGC TGGTTATTTG AAAATTGGCG ATATCAAGGG CGAAAGCCAA
AACGATGCTC ACCGGGAGGA AATCGAACTT CTCAGCTGGA GCTGGGGCAC CAACAGCAGC
ATGAATGGCT CGGGTAGCCT CTGCATCATG GATGTTGCTT TGGTCAAATA TACCGACAGT
GCCACCGTGG ATATTTTGAT GGGGCAGATG ATGGGCACCC AGTACCCCGA TGCCGAAATT
TCAATGACCC AAAGCGGCAG CGTGCGCACT GAGGACTACT TCAAGATGCG CATGCGCAAT
GTCACGGTAA CCAGTTATCA AACCGGTGGC AGTGGCTATG AGCGCATGAC TGAGAGTATC
ACTCTGCATT TCGATGAAGC GTCAATTGAG TACCGTCGTC CCGGGCCAGA TGGCAGCCCA
GGCGCTCCCG AAGTCACCCG TATCAGCTCC AGCAGCCATA AGTGCCACTG A
|
|---|
| Protein sequence | MRVSQWKRLG MLSALALGMT VGSAQGAGYL KIGDIKGESQ NDAHREEIEL LSWSWGTNSS
MNGSGSLCIM DVALVKYTDS ATVDILMGQM MGTQYPDAEI SMTQSGSVRT EDYFKMRMRN
VTVTSYQTGG SGYERMTESI TLHFDEASIE YRRPGPDGSP GAPEVTRISS SSHKCH
|
|---|
| |