| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0740 |
|---|
| Symbol | mtgA |
|---|
| ID | 4602993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 907739 |
|---|
| End bp | 908476 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639780075 |
|---|
| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| Protein accession | YP_926618 |
|---|
| Protein GI | 119773878 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA AAGACCTTGG AGGCGGCAAA AAGGCGGGGT TTATCGCCCG TACATGGCGC
GGATTCTGGC GCTGGAGCGC GCGGCTGCTG GTGGCATTTC TGATTCTATC GCTGGTGTTG
GTGGCAACAG TGAGCGTAAT CAATCCACCC ACCTGGGCCT GGCGTATCGA CAGGGCGCTG
TTTCCTCCGA AAGAAGATAT TCAGGTGCGC CACCAGTGGG TGCCATTGGA CAAGATTGCG
GCACATATGC AGCTTGCGGT TATCGCGGCC GAAGATCAGC GTTTTACCCT GCACAATGGG
GTCGACTTCG CGGCCATCAA AACGGCCATT GCAGACAGAG ATCCGGGAGA GCCCCTTCGC
GGCGCCAGTA CGCTCACCCA GCAAACGGCC AAGAATTTGT TTCTCTGGTC CTCACGCAGT
TTTGTGCGTA AGGGGCTTGA GGCCTGGTTT GCTCTGCTGC TGGATACCTT AAGCGGCAAG
CGTCGCACCC TGGAGCTGTA TCTCAATATC GTGGAGTTTG GGCCGGGGAT ATATGGCGTA
GAGGCCGCGT CACGTTATTA CTTCAATAAG GGCGCGGGCA AGCTTAGCAC CAGAGAAGCG
GCATTGCTGG CCGCCTTACT TCCCAATCCC TGGTCATATC GCATCAATCC GCCCACGGCG
TATATGAACC GGCGTGCCGA CTGGATTGCG CGGCAAATGC GACAGCTGGG GATGGCAACC
CTGAAAGACC TCGATTAG
|
|---|
| Protein sequence | MSEKDLGGGK KAGFIARTWR GFWRWSARLL VAFLILSLVL VATVSVINPP TWAWRIDRAL
FPPKEDIQVR HQWVPLDKIA AHMQLAVIAA EDQRFTLHNG VDFAAIKTAI ADRDPGEPLR
GASTLTQQTA KNLFLWSSRS FVRKGLEAWF ALLLDTLSGK RRTLELYLNI VEFGPGIYGV
EAASRYYFNK GAGKLSTREA ALLAALLPNP WSYRINPPTA YMNRRADWIA RQMRQLGMAT
LKDLD
|
|---|
| |