Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0724 |
Symbol | |
ID | 4602977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 888905 |
End bp | 890341 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639780059 |
Product | Zn-dependent peptidase-like protein |
Protein accession | YP_926602 |
Protein GI | 119773862 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATTGC TGGCAGTACT TGGCCTGACG ATGATGACAC TCGCGCCCCT TTCCGAATGC CAGTTCGATG ACCAGCCGTT AAGGCGTCTG GATGACGCCG TTGTGACAAG GCAGCTTGAT AATGGTATCC GACTGTTTTG GCTTCCAAAG GCAGGCAAAC AAAGCATCAC CCTGGCGAGC CGCTTTGCCG TAGGCTCTCG CCACGAGGCT TTGAGACAAA CCGGCTGGGC ACATTTGTTT GAGCATCTGC TTTTCAAGGG CAGTCGCCAG GCCCCCGGCG ATGGTTACAG CCAGCTGATG AACGCCATGG GAGCCAGTTT TAATGCCAGC ACCCTGTTCG ATGACACCCG CTACTACACC CGAATCCCCG CTCAGGGGCT GGCCTTTACC CTGGCGCTGG AGCGGGACCG CTTTGAGCAT CCGCAATTTG CCGTCGAGGC TATTACCAAT CAGCAAAAAA CCGTGCTGGC CGAAATGGCA CAAACCATAG ATAACCAACC CTACTTTCGT GCGGCGATGA CCTTTTTGCT GAGCCAGGCG ACGGATACAC CTTACCGTCA CGCCATTATC GGCAGTCGCG CCGACATCCT CGGTGCCGAT GCTGACAGCC TTAGGGCTTT TCATCGGCGC TTTTATCGGC CATCGCGTCT GAGTATGGCG CTCATCGGTG CCCTGCCCGG GGATGTTGAA ACCCAGATCA GGGGCCAATT TGGCACCTGG CATGAGCCGG CACAGCCACC CGAAACAGCA GGGTTCAACC AAGCGGCAGT TCCTGATGAC GCAGCGAAGC CAGATTTCAC TCTGCGCGCA CCCGTACATG GCGAAGTCAT AGATGAACGA GCCCCCTGGC CCGGGCTGCT GATGGCCTGG CACACGGTGG GGCGCAGTCA CCGGGATGCC GCCGCCATCA AGCTGCTGGA GCTCAGGCTG TTTCAGCGTA TCGCCAGTGG TCTCGAGCGA GCTGGCATCA GTGGCAAGCA GAGCCTGCTG CACTATTCTC TGCCGCTGGA AATGGAGCAC CATGGCATGA CCAATCTGGT ACTGGTGCCC CGGGCCAATG TGAGCCTGGA TACCCTGGCT GCGGGTATCG AAAAGCTGAT AGACCAGGCT GCCCGAGAGC CCATGAAAAA CACAGCGCTT TGCCAACTGA AACAGCTCTG GCTCGCCGAC TACCAGGAGC AGCTCAGCCG TGATGAAACC CTGGCGCAGT GGCTCGCCGC AAGCCCTGCC ACGGATAATG CACAGCCTCT GCTCAGCCCT TGGATCAGGA TACGGGATGT CAGTGAGGAC GACTTGATGC GGGTGGCGCA GCGCTATTTT GCAGGCCACA GCGTCCGGCT CGATTTAAAA CCGGCATGGC ACACCCGGCT TGGAAAAGGT CTGCTGGAAT GGCTCCCCGA AAGCTGGGCC GAAGGCCTTG AGGAACTTGC ATTATGA
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Protein sequence | MGLLAVLGLT MMTLAPLSEC QFDDQPLRRL DDAVVTRQLD NGIRLFWLPK AGKQSITLAS RFAVGSRHEA LRQTGWAHLF EHLLFKGSRQ APGDGYSQLM NAMGASFNAS TLFDDTRYYT RIPAQGLAFT LALERDRFEH PQFAVEAITN QQKTVLAEMA QTIDNQPYFR AAMTFLLSQA TDTPYRHAII GSRADILGAD ADSLRAFHRR FYRPSRLSMA LIGALPGDVE TQIRGQFGTW HEPAQPPETA GFNQAAVPDD AAKPDFTLRA PVHGEVIDER APWPGLLMAW HTVGRSHRDA AAIKLLELRL FQRIASGLER AGISGKQSLL HYSLPLEMEH HGMTNLVLVP RANVSLDTLA AGIEKLIDQA AREPMKNTAL CQLKQLWLAD YQEQLSRDET LAQWLAASPA TDNAQPLLSP WIRIRDVSED DLMRVAQRYF AGHSVRLDLK PAWHTRLGKG LLEWLPESWA EGLEELAL
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