| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0713 |
|---|
| Symbol | |
|---|
| ID | 4602966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 874525 |
|---|
| End bp | 875211 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639780048 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_926591 |
|---|
| Protein GI | 119773851 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGC ATCTGCGTCG AACTCAGCGC GGTCAGGCCA TGTTCGAATT CAATCTGGTG
TTGCCGCTTC TCATCCCCTT CGTGCTGCTG GGGATGATGC TGGCAGTACA GTGGGCGTTT
GTGTATGTGG CTAAAACCAC GCTGGATTCG GCGACTGCCA AAGCGGTACG TGCCGGTGCA
CTGGATCACG GCAGTCGCAG TGCGATGAAT CGGGCGTTGG CCGAAGGTCT GGTGCCTTTG
TATGTCCGTG AGACAGGACT GACAGACGCG CAGCTGGCCA TGGTCGAAGC GAGAGCCGCC
GTGGCGCTGC AAAGCAGGCT GACAGTGCTC AGCCCCACAC AGGCTGTGTT CGACCGTTTT
AAATACCGAG CCCGGGTCAA CAATAACTCG GTATACGAAA TCCCCAACGA CAACCTCATG
TACCGCAGCA CGGCACAACA GGATGTGGGT GACGGCCGTA AGCTCAATAT TCAGGACGCC
AATTTACTGC AAATAGAAGT GCGATGGTGC CACAAATTGG TGGTGCCATT TGCCAACTAT
ATGATTGAAA AGATTATTAC CTCGATAGAG TACCTGCCCG GCAATGAACA GCTTGCCTGT
AATGCTCTGG GTGCCGCCAC CGGGGATGTG TATTTGGCCA TGGTTTCACA GGGGATGATG
CGGATGCAAA CCCCCTTCAG GATGTAA
|
|---|
| Protein sequence | MKLHLRRTQR GQAMFEFNLV LPLLIPFVLL GMMLAVQWAF VYVAKTTLDS ATAKAVRAGA
LDHGSRSAMN RALAEGLVPL YVRETGLTDA QLAMVEARAA VALQSRLTVL SPTQAVFDRF
KYRARVNNNS VYEIPNDNLM YRSTAQQDVG DGRKLNIQDA NLLQIEVRWC HKLVVPFANY
MIEKIITSIE YLPGNEQLAC NALGAATGDV YLAMVSQGMM RMQTPFRM
|
|---|
| |