Gene Sama_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0712 
Symbol 
ID4602965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp874043 
End bp874528 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content56% 
IMG OID639780047 
Producthypothetical protein 
Protein accessionYP_926590 
Protein GI119773850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAG TGAGTAAAAT GTGGGCCTCC GTGGCCCTGA GTCTGATGTT GGTGGCGTGT 
AGTTCAACTG CCAATAAGCC CGATCACAAC GGCAATCCAC AGATTATGGC ACTGCAATCC
CAGGCCGAAG CCGCCTATAA GATGGCAAAG CTGGATCAGG CCGAGAGCCA GTATCTGCAG
GTGCTGCAGT CGGTGCCCAA CTATGCCCCC GCCTGGTTTC GTCTGGGTAA CATCTATACC
CGTACCGGTC GCCACGATGC CGCCATCGCC GCCTACCAAC GCTGTATCGA ACTGGAGCCG
GATAATCAAA AAGCCTGGTA CAACATGGGC TTGGTCCGTC TCAAACAATC CACCGAAATC
CTGGAGTCCA TTGAGCGCCG TGGTGATAAA GAGTCCCCCG TGGGCAGGCA GATAAGCGCC
CTGTTGGACG CACTCAATCA ATTGCAACGT GAACCCGGCG CTGACACCCA GGTGGGTATG
CAATGA
 
Protein sequence
MDRVSKMWAS VALSLMLVAC SSTANKPDHN GNPQIMALQS QAEAAYKMAK LDQAESQYLQ 
VLQSVPNYAP AWFRLGNIYT RTGRHDAAIA AYQRCIELEP DNQKAWYNMG LVRLKQSTEI
LESIERRGDK ESPVGRQISA LLDALNQLQR EPGADTQVGM Q