| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0685 |
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| Symbol | |
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| ID | 4602938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 846844 |
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| End bp | 848097 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639780020 |
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| Product | hypothetical protein |
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| Protein accession | YP_926563 |
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| Protein GI | 119773823 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTTT CGGCTTGGTT TCGCACTACA CCCCTGGCAT TGATGGGGAA ATTACAGGGA
TGGCCGCGCA ATGTGTGGTT GTTGACGTTG GCCCAGGCCC TGTCCATGAG CGCCACCCCC
ATCATGGTGC TGCTGGGCGG TTTGGTGGGC GCAAAAATAG CGCCCACAGC GCAGCTTGCC
ACGGCGCCTA TCGCCGTAAT GATCCTCGGC CTTGCCACCG CCGTGGTGCC CGTGGGTCTG
CTTGGCCGCA AATACGGCAG ACGCAGGGTG TTCCTGCTGG GTAGCTTGTT GGGCACTCTG
GCGGGTTTAA CCGCTGCCCT CGGGGTATAT CAGAACGACT TTGTGACTTT CTGTGTAGGT
GCGCTGCTCC TGGGGGCTGC CGGCGCCGTG GTGCAGCAGT ATCGCTTTGC TGCGATGGAG
GCCGTTGATC CTGTCAAGGC GCCAAGGGCT GCTTCCCGGG TGCTTCTTGG TGGACTGGTC
GCCGCTTTGC TTGGCCCTGA GCTGGCGGTC ATAGGCAGTG ATTTGATTGA TAACAGTTAC
GCCGGCGCTT TTTTGCTGCT GTCGGCCATC GCCCTGTGTG GTGGTTTGGT ACTGCTGGGA
TACAGCAATG AGTCCCAATG GCAAGGCGAT GCCGGTCCTG CGGTGTCTGA GACTGAGCGT
CCCCTCGGTG AACTCCTGTC CCAGAGTCGA CTCTGGGTGG CCATTGGCGG CGCGGCCATC
GGCTACGGCA TGATGAGCCT GATCATGACG GCCACACCGC TGCACATGCA TCATATGGAG
CATCACTCGC TGGCCGACAC CAAGTGGGTC ATTCAGAGCC ATATCATTGC CATGTATTTG
CCGTCTTTTG TCAGCGGTGC CCTGGTAGCC CGTTTCGGCC AGGGGGCCAT GATGATGGCA
GGCCTTGGGG CATATGGGGC AACCATCATT CTGGCATTGT CCGGTAGCGA TCTGCTGAAT
TACTGGACTG CGCTGGTGTT GTTGGGGGTA GGTTGGAACT TCCTGTTTGT GGCTGGGACA
TCGCTCCTGC CCTCCTGCTA TCGTGGTGCA GAGCGGTTCA GGATACAGAC CTTCAATGAT
TTTGCGGTAT TTGGTTTTCA GGCCATGGCG TCGCTTGGGG CAGGTGCTTT ACTTACCGGC
CTTGGTTGGC AGGTTTTGCT GGTGGCCTGT TTACCCTTTA TCGGGGTGCA GCTTATGCTG
CTGGCATGGT GGAAGTTGAG TAAAAGCAGG GTGTTACAAG CTGATAACAA TTGA
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| Protein sequence | MAFSAWFRTT PLALMGKLQG WPRNVWLLTL AQALSMSATP IMVLLGGLVG AKIAPTAQLA
TAPIAVMILG LATAVVPVGL LGRKYGRRRV FLLGSLLGTL AGLTAALGVY QNDFVTFCVG
ALLLGAAGAV VQQYRFAAME AVDPVKAPRA ASRVLLGGLV AALLGPELAV IGSDLIDNSY
AGAFLLLSAI ALCGGLVLLG YSNESQWQGD AGPAVSETER PLGELLSQSR LWVAIGGAAI
GYGMMSLIMT ATPLHMHHME HHSLADTKWV IQSHIIAMYL PSFVSGALVA RFGQGAMMMA
GLGAYGATII LALSGSDLLN YWTALVLLGV GWNFLFVAGT SLLPSCYRGA ERFRIQTFND
FAVFGFQAMA SLGAGALLTG LGWQVLLVAC LPFIGVQLML LAWWKLSKSR VLQADNN
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