| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0677 |
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| Symbol | |
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| ID | 4602930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 835288 |
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| End bp | 837207 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780012 |
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| Product | U32 family peptidase |
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| Protein accession | YP_926555 |
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| Protein GI | 119773815 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAG AAGGCGTTGA GATTTTTATT CCCGGCAAAC CCCAGGCCCT GGTGACCCCA
GAGCCGGTTA AGCTTGCCGA TAATAAGCTG GAGTTGCTGG CTCCCGCCAA AAACGCCGAT
TACGGAATCG AAGCCATTCG TCATGGCGCC GATGCAGTTT ACATAGGTGC CCCCGCCTTT
GGCGCTCGCC ACACCGCCGG TAACAGCATT GCCGACATTG CCCGTCTGTG TGAATTTGCC
CACCGTTACC ATGCCCAGGT GTTTGTTACC GTTAACACCA TCTTGTTTGA CTCAGAGCTG
GAAGACGCCC GCAAACTGAT TTGGGAAGTG TACGAGGCCG GTGCCGATGC CATTATCGTG
CAGGATATTG GTCTGCTGGA ACTTGATCTG CCGCCGATAG CGCTGCACGC CAGTACCCAG
ATGGATAACC GGGTGCCGGA AAAGGTGGCT TTTTTGGAGC ACGTCGGTTT TTCTCAGGCG
GTGCTGGCAC GTGAGCTGAG CCTGACTCAA ATTCGCGCCG TGGCGGCTGA AACCAAGATG
CGACTTGAGT TTTTTATCCA TGGCGCCCTG TGTGTGGCGT TCAGCGGCCA GTGCTATATC
AGTGAAGCCT ATACAGATAA CCGCAGTGCC AATCGGGGTG AGTGCTCACA ACAGTGTCGT
ATGCCGGGGA ACCTCAGTAC CCGCAAGGGT GAGGTGATTG CCACCAACGA GCACATGTTG
TCGCTCAAAG ACAACAACCA GACGGAAAAC CTCGAAGCCC TGATTGATGC CGGTATTCGC
TCTTTCAAGA TTGAGGGGCG TCTGAAGGAC TTGAGTTACG TAAAAAACGT GACTGCCCAC
TATCGTCAGC AGCTCGATGC CATCATGGCC CGCCGCCCCG AGTTTGAGCC TTCGTCCCAT
GGCCGCTGTA GCTACAGCTT TGTGCCTGAT CCGGACAAGA GCTTCAACCG CGGCAAGACA
GATTATTTCG TGCATGACCG TAAGCCGGGC ATTGCCGACT TCCGTACCCC AAAATACCTC
GGGATTGATG TGGGTAAGGT CAGCAAAATC GCCAAAGACC ACATAGTGGT AGACTCCAAT
GCCGAATTCA ATAACGGTGA TGGTCTGGGC TTTTTTGCCA AAAACTATGA AAAAGCCCGT
TTGTCAGATG ACAAACTCAC CGGATTCAGG GTGAACCGCG CCGAAGGCAA TGTGCTCTAT
CTCAAGACAG TGCCGGAAGA TCTGCGGGTA GGTGTCACCC TATACCGTAA CCACGATCAG
GCGTTTGAGA TGCTGCTGGC TAAAGAGTCG GCCGAGCGTT TGGTGACGGT AAACTTTGCC
CTGGCCGAGC GGGAGCAGGG GCTGGCATTG ACCGCCTTTG ATAACCATGG CCATTCAGTG
ACAGTGACCG CTGACTTTGA TAAGCAGCAG GCCAAGGATA TTGACCGCAA CTGTGAAGGG
CTGAAAAAGA ATCTGGGCAA GTTAGGAAAC ACTGACTTTT GCCTTGGTGA GATTGAACTG
GGTGATGCTG CTGCCGTGTT TGCGCCTGCG TCTGTCATTA ATAATCTGCG CCGCGATGCG
GTGGAGGCGC TTGGTCAGGC CCGTATTCAG GGCTACCAGC GCCCAACGCC CTGGGAGCGT
GATGACAGCG TGCGCTATCC CCAGCGCAGC ATGACTTACC TCAGTAACGT CGCCAACCAG
AAGGCCAAAG ACTTCTACAC CCGCCACGGT GTGGTTTCAA TCCGTGATGC CTATGAGGTG
CGTCCGGTAA AAGGTGATGC GCCCCTGATG ATCACCAAAC ACTGCATCCG CTACAGCTAC
AACATGTGTC CCAAGGAAGT GCCGGGCATC AAGGCAGACC CGCTGCAGAT GGAACTGGGT
GGCAAGGAAT TCAAGCTGGT GTTTGACTGC CACAAGTGTG AAATGCTGGT AGTAGGCTAA
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| Protein sequence | MSTEGVEIFI PGKPQALVTP EPVKLADNKL ELLAPAKNAD YGIEAIRHGA DAVYIGAPAF
GARHTAGNSI ADIARLCEFA HRYHAQVFVT VNTILFDSEL EDARKLIWEV YEAGADAIIV
QDIGLLELDL PPIALHASTQ MDNRVPEKVA FLEHVGFSQA VLARELSLTQ IRAVAAETKM
RLEFFIHGAL CVAFSGQCYI SEAYTDNRSA NRGECSQQCR MPGNLSTRKG EVIATNEHML
SLKDNNQTEN LEALIDAGIR SFKIEGRLKD LSYVKNVTAH YRQQLDAIMA RRPEFEPSSH
GRCSYSFVPD PDKSFNRGKT DYFVHDRKPG IADFRTPKYL GIDVGKVSKI AKDHIVVDSN
AEFNNGDGLG FFAKNYEKAR LSDDKLTGFR VNRAEGNVLY LKTVPEDLRV GVTLYRNHDQ
AFEMLLAKES AERLVTVNFA LAEREQGLAL TAFDNHGHSV TVTADFDKQQ AKDIDRNCEG
LKKNLGKLGN TDFCLGEIEL GDAAAVFAPA SVINNLRRDA VEALGQARIQ GYQRPTPWER
DDSVRYPQRS MTYLSNVANQ KAKDFYTRHG VVSIRDAYEV RPVKGDAPLM ITKHCIRYSY
NMCPKEVPGI KADPLQMELG GKEFKLVFDC HKCEMLVVG
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