| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0675 |
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| Symbol | |
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| ID | 4602928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 831444 |
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| End bp | 834530 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780010 |
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| Product | AcrB/AcrD/AcrF family transporter |
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| Protein accession | YP_926553 |
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| Protein GI | 119773813 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTAG CAGGCTATTT CGTCAAAAAC TCCGTCATCA GCTGGATGTT TACCCTGATC
CTCTTGTTGG GAGGCAGTGT TGCCTTTCTT GGCCTTGGCC AGCTTGAAGA TCCACCGTTT
ACCATTAAAG ACGCTGTGGT GATAACCCTT TACCCCGGAG CCACATCCAC CGAGGTTGAA
GAAGAGGTTA CGTATCCGGT AGAGAAAGCG ATTCAGGCGT TGCCCTATGT GGACAAGATT
AAGTCGCTCA GTACCTCCGG GTTATCGCAA ATCACTGTGA CCATGAAAAA CACCTATGGC
CCTGACCAGC TGCCGCAAAT TTGGGATGAA CTCAGGCGCA AGGTCAATGA TATGGCCGCG
AGCCTGCCTC CCGGCGCACA GCACCCCATG GTGAACGACG ACTTTGGCGA TGTGTACGGC
ATCATGCTGA TGATCACGGG TAAAGATTTC AGCTACCGCG AGCTCAAAGA CTACGTGGAC
TATGTAAAGC GTGAGCTGGA GTTGGTGCCC GGTGTCGGTA AGGTCTCGTT GGCCGGTGAG
CAAAAAGAAC AAATTTTTGT AGAAATGTCA GTGAACAAAG CTGCCAGCTC CAACCTGGAC
CCCAACCTGA TTGCCAACTT GCTCAATTCA CAGAATATGG TGTCAGATGC AGGCAATATT
CAGGTCTCTG GCGACAACCT CAAAATTCGC ACCAGCGGAA GCTCTCGCTC GGTGGAGGAG
TTGCAGGAAC TCATTATCCC CGGCACCCAG GGCGATAAGC TTATCTATTT GAAAGATGTG
GCTACCGTGC GCCGCGGTTA TCAGGAAATC CCCACCAATG TGCTCAGTTA CAACCGCGAG
CGTGCTATCA ATCTGGGGAT CTCATTTTCA TCCGGCGTCA ACGTGGTGGC TGTAGGTAAG
GCAGTTGATG ATAAATTGGC TCAAATCGAC TCGGCCCGCC CTGCGGGCAT CAAAATTGAG
ACCATGTATA ACCAGCCGGT GGAAGTGGAC AATTCTGTCG GCAGCTTTGT TTGGAATCTG
ATAGCCGCTG TCGTGATTGT GATAGGCGTG CTGCTGTTCT TTATGGGCGT AAAAAGCGGC
ATCCTGATAG GCCTTATCCT GTTTTTAACC TGTTTGGGCA CCTTTGTGTT GATGCTGCAG
GCTGAGATTG AACTGCAGCG TATTTCCCTG GGAGCGCTCA TTATTGCGTT AGGGATGCTG
GTGGATAACG CCATTGTGGT GGTGGAAGGG ATTTTGATTG GCCGCCAGCA GGGAAAAACC
ACCTTGGAAG CATCCGATGC CATTGTAAAG CAAACCATGT GGCCACTGCT TGGGGCTACA
GTCATTGCCA TCACCGCCTT TGCGCCCATT GGTTTGTCAC CGGACTCCAC CGGCGAGTTT
GCCGGCTCGC TGTTTTGGGT GCTGCTGTTT TCCCTTTTCC TTTCCTGGAT CACCGCCATC
ACCATCACGC CTTTTTTTGC CAGTCTCTTT TTTGGTGATA AAGGGGAGGA ACAGCTTGAA
GGTCAAACCA AAGACCCTTA TGGCGGCGCC TTCTTTACCC TTTATAAAGT CGCACTGGAT
GTGTGCATGC GCTATCGCTT TATCAGCGTG ATTGCGGTAG TGCTGGCGTT TGTGGCGTCT
GTGGTCGGGT TTGGTTACGT GAAACAATCA TTTTTCCCAC CCTCAACCAC CCCCATATTT
TTGGTGGATG TGTGGCTGCC TGAAGGGACT GATATCCGCG AAACCCAGCG GATAGTAACT
GCCATGGAAG ATAAGGCTGC GCAGCTGGCG GATGTGGAAT TTGTGGCGTC CACCGTTGGC
AAGGGATTCC CCCGATTTAT GCTGACTTAT GCCCCGGAAA AGAATTATGC CTCTTACGGC
CAGATAGCCA TTCGCACCAG CGCGTTCGAG ACACTCGAAG GGGTGATGAC CCAGTTCCGC
CGCGAAATGG AGGCGGGCTT TCCGCAAACC CAACTCAAGT TTAAACGGCT GGAAGTGGGA
CCCTCCACCG ATGCCAAGAT TGAGGCCCGG ATCTCAGGAC CGGATCCTGA TGTGCTAAGA
ACCCTCGGGG CAGAGGTGCA GGCGGTATTT GCGGCCACAC CGGGCACAGT GAATGTGCGC
CACGATTGGC GCGAACGGGT GAAATACATA GCGCCCAGGT TTAATGAAAC CCAGGCCAGA
CGTTTGGGCA TTGTGAAAAG TGAAGTGGAC AAGGCGCTCA AGTTTTCCTT TGCCGGATTG
CAGATAGGGG TTTATCGCGA AGGCACTAAT CTACTGTCTA TCGTGGGTCG GTTGCCGGAT
GATGAGCGGG TCGATATCGA ATCGATGGAA AGCATCCGGA TCTGGAGTCC TGTGCTGAAC
ACACTTGTGC CTCTGCAGCA GGTAGTCGAT GGATTCGAGG TGAAGTTCGA AGACCCCATC
ATTCAGCGCC GGGATCGCAA GCGCACACTG ACAGTCTTCG CCGATGCCGA TTTTGAGTAC
GACCTGCTGC CTGCTGAGCT GTTTGCCAAA GTTCGACCAC AGGTGGAAGC CATCAGCATG
CCGCCCGGAT ATGAACTTGT GTGGGGAGGC GAGTTTGAGT CATCACAGGA TGCCCAGGAG
TCGCTGTTTG CCATTTTGCC GATGGGTTTC CTGTTTATGT TTTTGGTAAC GGTATTCCTG
TTTAACTCGG TGCGTAAGCC GCTGGTGATC TGGGCCTGTG TCCCGCTGGC CATTATCGGT
ATTACCCTGG GATTGTTGGT ACTCGATAAA CCCTTCAGCT TTATGGCGTT GCTGGGGATG
CTCAGTCTGT CGGGAATGCT GCTTAAGAAC GGCATAGTGC TGCTTGACCA AATCAATCTG
GAAATCAATG AGGGTAAGGA GCCCTTCCAG GCGGTGTTTG AGTCTACGGT TAGCCGCGTC
AGGCCCGTAT GTATGGCGGC TGTCACGACC ATTTTGGGGA TGTTGCCGCT TATCACCGAT
GCCTTCTTTG AGTCCATGGC GGCGGTGGTC ATGTTCGGCC TTGGTGTGGC GACAGTGCTG
ACCTTGCTGA TTGTGCCTGT GTTTTACATC ATCTTTTTCA AGATACCCTA TCGGGCCTAC
GGCGACTTTC AGAAGTCCAG CGGCTGA
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| Protein sequence | MSVAGYFVKN SVISWMFTLI LLLGGSVAFL GLGQLEDPPF TIKDAVVITL YPGATSTEVE
EEVTYPVEKA IQALPYVDKI KSLSTSGLSQ ITVTMKNTYG PDQLPQIWDE LRRKVNDMAA
SLPPGAQHPM VNDDFGDVYG IMLMITGKDF SYRELKDYVD YVKRELELVP GVGKVSLAGE
QKEQIFVEMS VNKAASSNLD PNLIANLLNS QNMVSDAGNI QVSGDNLKIR TSGSSRSVEE
LQELIIPGTQ GDKLIYLKDV ATVRRGYQEI PTNVLSYNRE RAINLGISFS SGVNVVAVGK
AVDDKLAQID SARPAGIKIE TMYNQPVEVD NSVGSFVWNL IAAVVIVIGV LLFFMGVKSG
ILIGLILFLT CLGTFVLMLQ AEIELQRISL GALIIALGML VDNAIVVVEG ILIGRQQGKT
TLEASDAIVK QTMWPLLGAT VIAITAFAPI GLSPDSTGEF AGSLFWVLLF SLFLSWITAI
TITPFFASLF FGDKGEEQLE GQTKDPYGGA FFTLYKVALD VCMRYRFISV IAVVLAFVAS
VVGFGYVKQS FFPPSTTPIF LVDVWLPEGT DIRETQRIVT AMEDKAAQLA DVEFVASTVG
KGFPRFMLTY APEKNYASYG QIAIRTSAFE TLEGVMTQFR REMEAGFPQT QLKFKRLEVG
PSTDAKIEAR ISGPDPDVLR TLGAEVQAVF AATPGTVNVR HDWRERVKYI APRFNETQAR
RLGIVKSEVD KALKFSFAGL QIGVYREGTN LLSIVGRLPD DERVDIESME SIRIWSPVLN
TLVPLQQVVD GFEVKFEDPI IQRRDRKRTL TVFADADFEY DLLPAELFAK VRPQVEAISM
PPGYELVWGG EFESSQDAQE SLFAILPMGF LFMFLVTVFL FNSVRKPLVI WACVPLAIIG
ITLGLLVLDK PFSFMALLGM LSLSGMLLKN GIVLLDQINL EINEGKEPFQ AVFESTVSRV
RPVCMAAVTT ILGMLPLITD AFFESMAAVV MFGLGVATVL TLLIVPVFYI IFFKIPYRAY
GDFQKSSG
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