Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0670 |
Symbol | |
ID | 4602923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 826433 |
End bp | 827368 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639780005 |
Product | melanin biosynthesis protein TyrA, putative |
Protein accession | YP_926548 |
Protein GI | 119773808 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2837] Predicted iron-dependent peroxidase |
TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAATC AGGTTATGCC ACGTGAACAG TTGGGCGTAT GCGCCGAAGG CAATCTTCAC GCAGTTTATC TGATGTTCAA CGCCAATGAA GGGGTTGAGC AGTCGCTGCG TGCGAGCCTT GCCAGTGTTG CCCAATACCT TTACGACCTC ACAGACCAAT ATGCCGACAG TGCCTTTAAT GGGTTCGTGG CTGTGGGGGC TAACTATTGG GACAGTCTCT TTGGTCAGGG GCGCCCGTCT CAACTCAAGC CCTTCCCGGC CATGCACGAA GGCAACCGGG AGGCTCCGGC GCTGGAGTAC GACTTATTCG TACACTTGCG GTGTGATCGT CTGGACATAC TGCATCTGGT GGCCAATGAA GTGAATCAGA TGCTCGATGA GCTGGTGGAG CTGGTGGACG AAGAGCGCGG TTTCCGCTTT ATGGATAACC GGGACCTGAC CGGATTTGTG GATGGTACCG AAAATCCCCG TGGTCGCCAC CGTCAGGATG TCGCCTTGGT GGGGGATGAA GATCCGGCGT TCCGTGGAGG GGCTTATGTG CATGTACAAA AGTTTGCCCA TAACCTGTCG AAGTGGCACC GTTTGCCGGT GAAAAAGCAG GAAGACATCA TTGGCCGTAC CAAGGTAGAC AATATCGAAT ATGAGTCTGC CGATAAGCCT TTGACCAGCC ACATCAAAAG AGTGAATCTG AAAGATGAGC AAGGTAACTC GATGGAGATT TTGCGTCAGA GCATGCCCTA TGGCTCGGTG AAAGAGCAGG GTTTGATGTT CATCTCTGTC TGCCGTACCC CCTCTCATTT TGAAAAGATG CTGCATTCCA TGGTGCACGG CGATGGCGAA GGAAATCACG ATCACCTGAT GCATTTCACC CGCGCCCTGA CTGGCTCATC GTTTTTTGCG CCGTCGCTGG ATTATTTACT CCAGGGGCAG GATTAA
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Protein sequence | MDNQVMPREQ LGVCAEGNLH AVYLMFNANE GVEQSLRASL ASVAQYLYDL TDQYADSAFN GFVAVGANYW DSLFGQGRPS QLKPFPAMHE GNREAPALEY DLFVHLRCDR LDILHLVANE VNQMLDELVE LVDEERGFRF MDNRDLTGFV DGTENPRGRH RQDVALVGDE DPAFRGGAYV HVQKFAHNLS KWHRLPVKKQ EDIIGRTKVD NIEYESADKP LTSHIKRVNL KDEQGNSMEI LRQSMPYGSV KEQGLMFISV CRTPSHFEKM LHSMVHGDGE GNHDHLMHFT RALTGSSFFA PSLDYLLQGQ D
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