Gene Sama_0669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0669 
Symbol 
ID4602922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp824619 
End bp826325 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content55% 
IMG OID639780004 
Productgamma-glutamyltransferase 
Protein accessionYP_926547 
Protein GI119773807 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0405] Gamma-glutamyltransferase 
TIGRFAM ID[TIGR00066] gamma-glutamyltranspeptidase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGT TTACAATCAC TATTTTAGCC CTGGCCGCTA TCGGACTGGG CTGCAGCGAA 
GGAGTGTTGG CCATGGACAG GATCACAGGT AAGGCGTTTG CCAGTCGTTC GGAGGTATAT
GCCACCCAGG GCATGGCGGC GACCAGCCAG CCTTTGGCCA CTCAAGTTGC TCTGGATATA
TTGAAAGCCG GCGGCAGTGC GGTGGATGCC GCCATTGCCG CCAATGCCAT GTTGGGGCTG
GTAGAACCCA CAGGCTCGGG TGTCGGTGGC GACCTGTTTG CCATCGTCTG GAGCGCTAAA
GACAAACGCT TATACGGCTT AAATGCCTCG GGCCGCAGCC CAAAAACGCT CACGCTGGAT
ATGCTTAAGG CGCAGGGACT TGAATTTTTA CCGCCCTTTG GTCCATTGCC TGTGTCTGTG
CCCGGCGCAG TGGATGGCTG GTTTGAGCTG CATGACCGCT TTGGCAAATT GCCAATGTCG
CAAATTTTGT CGCCATCCAT TGATTACGCG CGCAAGGGCT TCCCGGTTTC TGAACTCATC
GCCTTTTATC TTGAAGGCAG CGCCCGACGT CTCGCCAAAT ATCCGGGGTT CAGTGAAACC
TATATGCCCA ATGGCAAAAT GCCCGCCAGG GGCGACATCA TGAAAAATCC CGCCCTGGCC
AACACCTACG AAAAAATAGC CAAGGGTGGC CGGGATGCGT TTTATAAGGG CGACATAGCC
CGCAGCATAG ACAAGTACAT GAAAGCCAAT GGCGGTTACC TCGGCTACGA GGACCTGGCC
TCACATACCA GTGAGTGGGT TGAACCCGTA TCGGTAAATT ACCGCGGTTT TGATGTGTGG
GAGCTGCCGC CAAACGGTCA GGGCATAGCA GCGCTGCAAA TTTTAAAAAC GCTGGAGCCG
TTTGATTTAA GAGCCATGGG TCATGACAGC GTTGAGTATG TGCACCATTT TGTGGAGGCT
AAAAAGCTTG CCTTCGCTGA CAGAGCGCGT TTTTACGCCG ACATGGCCTT TGCTGATGTG
CCCGTGAGTG AGCTTATTTC AGAGCGCTAC AACCAAGAGC GTGCCAAGCA GATAGGCCCC
AGAGCGGCCA AGTCGGTAGA GCCGGGCAAT CCCAATCTGC AGCAGGGCGA TACCGTGTAT
CTCACCACCG CAGACAGTGA CGGTAACATG GTGTCACTTA TTCAAAGTAA TTTCCGCGGC
ATGGGCTCGG GCATGACACC TCCGGATCTC GGCTTTGTAC TGCAGGACAG AGGGCAGTTG
TTTGATTTAA CGCCGGGGCG CCCTAATTCT TACGCACCCG GCAAGCGTCC CTTCCATACC
ATCATTCCGG CGTTTGTGAC CAAAGACGGT AAACCCTGGC TCAGTTTTGG GGTGATGGGC
GGTGCCACAC AGCCGCAAAT GCATGCGCAA ATTATCATTA ATCTCATCGA TTTTGACATG
AACCTGCAGG AAGCCGGCGA TGCGCCACGT ATTCTGCATT CAGGCTCCAG TGAACCCACC
GGCGAAGTGA TGACCGATGG TGGTTATGTG AGCCTGGAGT CGGGCTTTTC CATGGAGACG
CGTCGAGAAC TGGTGAAAAA AGGCCATGTG CTCCGGGATG CCCTGGGGGA GTTTGGTGGT
TATCAGGCTA TCGGCATCAA TGTGGAAACC GGTGTCTATC GCGGTGCTTC CGAGAGCCGC
AAAGATGGTC AGGCCGCCGG CTATTAG
 
Protein sequence
MNRFTITILA LAAIGLGCSE GVLAMDRITG KAFASRSEVY ATQGMAATSQ PLATQVALDI 
LKAGGSAVDA AIAANAMLGL VEPTGSGVGG DLFAIVWSAK DKRLYGLNAS GRSPKTLTLD
MLKAQGLEFL PPFGPLPVSV PGAVDGWFEL HDRFGKLPMS QILSPSIDYA RKGFPVSELI
AFYLEGSARR LAKYPGFSET YMPNGKMPAR GDIMKNPALA NTYEKIAKGG RDAFYKGDIA
RSIDKYMKAN GGYLGYEDLA SHTSEWVEPV SVNYRGFDVW ELPPNGQGIA ALQILKTLEP
FDLRAMGHDS VEYVHHFVEA KKLAFADRAR FYADMAFADV PVSELISERY NQERAKQIGP
RAAKSVEPGN PNLQQGDTVY LTTADSDGNM VSLIQSNFRG MGSGMTPPDL GFVLQDRGQL
FDLTPGRPNS YAPGKRPFHT IIPAFVTKDG KPWLSFGVMG GATQPQMHAQ IIINLIDFDM
NLQEAGDAPR ILHSGSSEPT GEVMTDGGYV SLESGFSMET RRELVKKGHV LRDALGEFGG
YQAIGINVET GVYRGASESR KDGQAAGY