Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0669 |
Symbol | |
ID | 4602922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 824619 |
End bp | 826325 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639780004 |
Product | gamma-glutamyltransferase |
Protein accession | YP_926547 |
Protein GI | 119773807 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGGT TTACAATCAC TATTTTAGCC CTGGCCGCTA TCGGACTGGG CTGCAGCGAA GGAGTGTTGG CCATGGACAG GATCACAGGT AAGGCGTTTG CCAGTCGTTC GGAGGTATAT GCCACCCAGG GCATGGCGGC GACCAGCCAG CCTTTGGCCA CTCAAGTTGC TCTGGATATA TTGAAAGCCG GCGGCAGTGC GGTGGATGCC GCCATTGCCG CCAATGCCAT GTTGGGGCTG GTAGAACCCA CAGGCTCGGG TGTCGGTGGC GACCTGTTTG CCATCGTCTG GAGCGCTAAA GACAAACGCT TATACGGCTT AAATGCCTCG GGCCGCAGCC CAAAAACGCT CACGCTGGAT ATGCTTAAGG CGCAGGGACT TGAATTTTTA CCGCCCTTTG GTCCATTGCC TGTGTCTGTG CCCGGCGCAG TGGATGGCTG GTTTGAGCTG CATGACCGCT TTGGCAAATT GCCAATGTCG CAAATTTTGT CGCCATCCAT TGATTACGCG CGCAAGGGCT TCCCGGTTTC TGAACTCATC GCCTTTTATC TTGAAGGCAG CGCCCGACGT CTCGCCAAAT ATCCGGGGTT CAGTGAAACC TATATGCCCA ATGGCAAAAT GCCCGCCAGG GGCGACATCA TGAAAAATCC CGCCCTGGCC AACACCTACG AAAAAATAGC CAAGGGTGGC CGGGATGCGT TTTATAAGGG CGACATAGCC CGCAGCATAG ACAAGTACAT GAAAGCCAAT GGCGGTTACC TCGGCTACGA GGACCTGGCC TCACATACCA GTGAGTGGGT TGAACCCGTA TCGGTAAATT ACCGCGGTTT TGATGTGTGG GAGCTGCCGC CAAACGGTCA GGGCATAGCA GCGCTGCAAA TTTTAAAAAC GCTGGAGCCG TTTGATTTAA GAGCCATGGG TCATGACAGC GTTGAGTATG TGCACCATTT TGTGGAGGCT AAAAAGCTTG CCTTCGCTGA CAGAGCGCGT TTTTACGCCG ACATGGCCTT TGCTGATGTG CCCGTGAGTG AGCTTATTTC AGAGCGCTAC AACCAAGAGC GTGCCAAGCA GATAGGCCCC AGAGCGGCCA AGTCGGTAGA GCCGGGCAAT CCCAATCTGC AGCAGGGCGA TACCGTGTAT CTCACCACCG CAGACAGTGA CGGTAACATG GTGTCACTTA TTCAAAGTAA TTTCCGCGGC ATGGGCTCGG GCATGACACC TCCGGATCTC GGCTTTGTAC TGCAGGACAG AGGGCAGTTG TTTGATTTAA CGCCGGGGCG CCCTAATTCT TACGCACCCG GCAAGCGTCC CTTCCATACC ATCATTCCGG CGTTTGTGAC CAAAGACGGT AAACCCTGGC TCAGTTTTGG GGTGATGGGC GGTGCCACAC AGCCGCAAAT GCATGCGCAA ATTATCATTA ATCTCATCGA TTTTGACATG AACCTGCAGG AAGCCGGCGA TGCGCCACGT ATTCTGCATT CAGGCTCCAG TGAACCCACC GGCGAAGTGA TGACCGATGG TGGTTATGTG AGCCTGGAGT CGGGCTTTTC CATGGAGACG CGTCGAGAAC TGGTGAAAAA AGGCCATGTG CTCCGGGATG CCCTGGGGGA GTTTGGTGGT TATCAGGCTA TCGGCATCAA TGTGGAAACC GGTGTCTATC GCGGTGCTTC CGAGAGCCGC AAAGATGGTC AGGCCGCCGG CTATTAG
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Protein sequence | MNRFTITILA LAAIGLGCSE GVLAMDRITG KAFASRSEVY ATQGMAATSQ PLATQVALDI LKAGGSAVDA AIAANAMLGL VEPTGSGVGG DLFAIVWSAK DKRLYGLNAS GRSPKTLTLD MLKAQGLEFL PPFGPLPVSV PGAVDGWFEL HDRFGKLPMS QILSPSIDYA RKGFPVSELI AFYLEGSARR LAKYPGFSET YMPNGKMPAR GDIMKNPALA NTYEKIAKGG RDAFYKGDIA RSIDKYMKAN GGYLGYEDLA SHTSEWVEPV SVNYRGFDVW ELPPNGQGIA ALQILKTLEP FDLRAMGHDS VEYVHHFVEA KKLAFADRAR FYADMAFADV PVSELISERY NQERAKQIGP RAAKSVEPGN PNLQQGDTVY LTTADSDGNM VSLIQSNFRG MGSGMTPPDL GFVLQDRGQL FDLTPGRPNS YAPGKRPFHT IIPAFVTKDG KPWLSFGVMG GATQPQMHAQ IIINLIDFDM NLQEAGDAPR ILHSGSSEPT GEVMTDGGYV SLESGFSMET RRELVKKGHV LRDALGEFGG YQAIGINVET GVYRGASESR KDGQAAGY
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