Gene Sama_0663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0663 
Symbol 
ID4602916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp818702 
End bp819484 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content55% 
IMG OID639779998 
Productferredoxin--NADP reductase 
Protein accessionYP_926541 
Protein GI119773801 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0650463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAC TGCAGCCACA GAGTAGGGGA GGCGATATGT GGGTTGAAGG CCGGGTGTTG 
CAGCGAAGGG ATTGGACCGA CAAGTTGTTC AGTCTCAGGA TTGACGCCAA AATAGCGCCC
TTTATCGCGG GCCAGTTTAT CAAACTCAGT TTACCCAGCG AGGATAAGCG CATTGCCCGT
GCTTATTCTC TGGTTAACCC TCCCAGAACC GATTATATCG AGGTGCTGGC CGTTGCCGTT
GAAGAGGGCG AGCTCTCTCC AAGGCTGCAG GACTTAAGCC CTGGTGATGT ACTTCAGGTT
TCGGCCAGTG CAACCGGCTT TTTAACCTTG AATGAATTAC CCGACGCTCC TGCAGCTGGG
CGTCAGCTTT GGATGCTGGC CACAGGCACC GCCGTTGGCC CCTTTATTTC CATGCTTGGC
ACCGAGGAGC CCTGGCAAAG GTTTGAACAC CTGGTGCTTG TGTATGGGGT TCGCCGGGCT
GAGGATTTGG CTTATCTTGA CGAGTTGCAA GCCCTGGCAG CAAGCAGGCC CGGACTGCAG
CTCATCTTAT CGGTTACCCG GGAGTCAGTA CCCGGAGCCA TGCAACTGAG GATACCCGAT
GCGTTGGCCT CTGGCGCGCT CGAAGCTGCC AGCGGCCTTA CATTGTCTGC CGAGCATTCT
CAGGTGATGA TTTGTGGTAA CCCCGAGATG GTTGCAAGCA CCCAGGCATT GTTGCTGGAA
CGTGGTCTTA GTAAAAACCT TCGCAGGGCA CCCGGGCAAA TCACCGTGGA AAAATACTGG
TAA
 
Protein sequence
MLELQPQSRG GDMWVEGRVL QRRDWTDKLF SLRIDAKIAP FIAGQFIKLS LPSEDKRIAR 
AYSLVNPPRT DYIEVLAVAV EEGELSPRLQ DLSPGDVLQV SASATGFLTL NELPDAPAAG
RQLWMLATGT AVGPFISMLG TEEPWQRFEH LVLVYGVRRA EDLAYLDELQ ALAASRPGLQ
LILSVTRESV PGAMQLRIPD ALASGALEAA SGLTLSAEHS QVMICGNPEM VASTQALLLE
RGLSKNLRRA PGQITVEKYW