Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0663 |
Symbol | |
ID | 4602916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 818702 |
End bp | 819484 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639779998 |
Product | ferredoxin--NADP reductase |
Protein accession | YP_926541 |
Protein GI | 119773801 |
COG category | [C] Energy production and conversion |
COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0650463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAAC TGCAGCCACA GAGTAGGGGA GGCGATATGT GGGTTGAAGG CCGGGTGTTG CAGCGAAGGG ATTGGACCGA CAAGTTGTTC AGTCTCAGGA TTGACGCCAA AATAGCGCCC TTTATCGCGG GCCAGTTTAT CAAACTCAGT TTACCCAGCG AGGATAAGCG CATTGCCCGT GCTTATTCTC TGGTTAACCC TCCCAGAACC GATTATATCG AGGTGCTGGC CGTTGCCGTT GAAGAGGGCG AGCTCTCTCC AAGGCTGCAG GACTTAAGCC CTGGTGATGT ACTTCAGGTT TCGGCCAGTG CAACCGGCTT TTTAACCTTG AATGAATTAC CCGACGCTCC TGCAGCTGGG CGTCAGCTTT GGATGCTGGC CACAGGCACC GCCGTTGGCC CCTTTATTTC CATGCTTGGC ACCGAGGAGC CCTGGCAAAG GTTTGAACAC CTGGTGCTTG TGTATGGGGT TCGCCGGGCT GAGGATTTGG CTTATCTTGA CGAGTTGCAA GCCCTGGCAG CAAGCAGGCC CGGACTGCAG CTCATCTTAT CGGTTACCCG GGAGTCAGTA CCCGGAGCCA TGCAACTGAG GATACCCGAT GCGTTGGCCT CTGGCGCGCT CGAAGCTGCC AGCGGCCTTA CATTGTCTGC CGAGCATTCT CAGGTGATGA TTTGTGGTAA CCCCGAGATG GTTGCAAGCA CCCAGGCATT GTTGCTGGAA CGTGGTCTTA GTAAAAACCT TCGCAGGGCA CCCGGGCAAA TCACCGTGGA AAAATACTGG TAA
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Protein sequence | MLELQPQSRG GDMWVEGRVL QRRDWTDKLF SLRIDAKIAP FIAGQFIKLS LPSEDKRIAR AYSLVNPPRT DYIEVLAVAV EEGELSPRLQ DLSPGDVLQV SASATGFLTL NELPDAPAAG RQLWMLATGT AVGPFISMLG TEEPWQRFEH LVLVYGVRRA EDLAYLDELQ ALAASRPGLQ LILSVTRESV PGAMQLRIPD ALASGALEAA SGLTLSAEHS QVMICGNPEM VASTQALLLE RGLSKNLRRA PGQITVEKYW
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