Gene Sama_0650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0650 
Symbol 
ID4602903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp806138 
End bp806476 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content51% 
IMG OID639779985 
Productnitrogen regulatory protein P-II 
Protein accessionYP_926528 
Protein GI119773788 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.367034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGG TGAGTGCAAT CATCAAACCC TTCAAACTCG ACGATGTGCG TGAAGCCATC 
GCCGGCATGG GTATCGAAGG TATGACAGTA ACCGAGGTCA AAGGTTTTGG CCGTCAGAAG
GGGCACACCG AACTATACCG GGGTGCCGAA TATCAGGTGG ATTTTCTGCC CAAGATAAAG
CTGGATATCG CTACCAAGGC TGAAAATGTC GAGCTGCTGT TGGAGGCCAT CGTAAAAGCG
GCCCATACCG GCAAAATCGG TGACGGTAAA ATCTTTGTCA CCGATTTAGA GCAAGCGGTC
CGAATTCGGA CCGGTGAAAC TGACGACGAA GCACTGTAA
 
Protein sequence
MKLVSAIIKP FKLDDVREAI AGMGIEGMTV TEVKGFGRQK GHTELYRGAE YQVDFLPKIK 
LDIATKAENV ELLLEAIVKA AHTGKIGDGK IFVTDLEQAV RIRTGETDDE AL