| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0647 |
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| Symbol | |
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| ID | 4602900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 801916 |
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| End bp | 803628 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779982 |
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| Product | nitrate/nitrite sensor protein NarQ |
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| Protein accession | YP_926525 |
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| Protein GI | 119773785 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.469097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTG GCAGTCTCAC CTCCAAAATT CTCGGACTGA TGATGGTGCT TATCCTGCTC
TCCAGTGGGC TATCTATCTT TGCGCTCGCC AACCTGTCGT ACAGCCTTGG CGATGCCCGG
GCAATCAATG CCTCCGGCTC ACTGCGGATG CAAAGCTACC GGCTGATGTT TTACGCCAAT
TCAGGCAGTG AAGAGGCCGA AGACAAAATC CGTGAGTTTG AAGCCACCCT CTACTCACCT
GCACTCAAAA ACTCCCTTAA CTGGAGTACC CCCCAACGCC TGAAAGACCA ATATCTGCTG
GTTATCGACA AATGGAAGGT GATGAAATAC TTCATCGAAG AGGAAAACTC GCGCCTGTAT
GCCTCTTCGT TAAAGGACTT TGTCGATACC ATCGACCTGT TCGTGCTGGA AACCGAACAT
CACGCCGCCT TTAAATTAAA ATTGCTGGCA GCCAGCCAGT TACTGGGCCT GGGTATGATG
CTTGCCATTG CTCTGGTGGC GGTGCGCTAC ACCAAGCGCA AGGTGGTGGA GCCGTTAAAC
CAATTGATGC TCTCCGCCAA CACCATTTCC AAAGGCAATT TCGATGTGGA CATGCCCCAG
ACTGAGTATA TCGAGCTGCA GGCGCTGGCC GATGCACTGG ACTCCACCGC CAAGGAGTTG
TCTGCGCTCT ATGGGGATCT TGAGTCTCAG GTTCAGGAAA AAACCCTCGC ACTGACCCGT
GCCAATCAGG AACTCAACTT TCTCTACGAC AACCTGGTGA TGCTGCACGG CAAAACCCTC
GATTACCGCG CACTGAAAGC AGCGTTGGAT CAGCTCAAAC AATATGAACA GCTGGACTAT
TTGCGACTGA TTATTCAGGA CGAAGGGGAC ATAGAAGAAG CCATTGAAGC CGAAGGTGGC
TGGCCGGCAG AGATTGAAGC TTCGTGCCGT TTTCCACTCA CCTTTGAGCA TACGGATTTG
GGCTACCTCG AGATGGTGTC AGACAAGGCG CCCAATCGCC CCCTGTTTGA GAACTTCGCC
ATCATGCTGG CCCGTTCCAT TCTTATCCAT CAATCAGCCG AGCAGCGTCA GCAACTGGCG
TTGATGGAAG AGCGGGGTGT GATTGCCCGC GAGCTGCATG ATTCGCTGGG GCAGGTGCTC
TCGTTCCTCA AAATCCAAAT CACCCTGCTC AGAAAAGGCC TTGACGACAG CTGCCGCAAC
CCTGAAGTCG AGCAACAACT CAATGAAATC AATGAAGGCG TGAGCACCGC CTATGTGCAG
CTCAGGGAAC TGCTTTCAAC CTTCCGCCTC ACCATCAAAG AGCCCAATCT CAAACACGCG
CTCGAAGCCA TGTTGGAGCA GCTTCGCAGT CAAACGCACA CCAAGCTCAC CCTGGATTAC
GGTATCCGCG AGCAACTGCT TGGCGCCAAC CAGCACATTC ACATACTGCA ATTAACCCGC
GAAGCCACCT TAAATGCCAT AAAACATGCC AACGCCAGTG AAATTGTGAT TCAATGCGCT
AAGAATAACG AAGGTATGAT CAATATCAGT GTCAGTGATG ATGGTGTTGG TATAGAACAC
CTCAAAGAGC GGGATCAGCA TTTCGGCATT GGCATCATGC ACGAGCGAGC CAGCAAGCTC
GAGGGCCAAC TGCGCTTTTC CAGCAATGAA GCCGGTGGTA CAACTGTCAC ACTCACACTT
CCCCCACATC AGGAGTCAAG TCAACATGGG TAA
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| Protein sequence | MKRGSLTSKI LGLMMVLILL SSGLSIFALA NLSYSLGDAR AINASGSLRM QSYRLMFYAN
SGSEEAEDKI REFEATLYSP ALKNSLNWST PQRLKDQYLL VIDKWKVMKY FIEEENSRLY
ASSLKDFVDT IDLFVLETEH HAAFKLKLLA ASQLLGLGMM LAIALVAVRY TKRKVVEPLN
QLMLSANTIS KGNFDVDMPQ TEYIELQALA DALDSTAKEL SALYGDLESQ VQEKTLALTR
ANQELNFLYD NLVMLHGKTL DYRALKAALD QLKQYEQLDY LRLIIQDEGD IEEAIEAEGG
WPAEIEASCR FPLTFEHTDL GYLEMVSDKA PNRPLFENFA IMLARSILIH QSAEQRQQLA
LMEERGVIAR ELHDSLGQVL SFLKIQITLL RKGLDDSCRN PEVEQQLNEI NEGVSTAYVQ
LRELLSTFRL TIKEPNLKHA LEAMLEQLRS QTHTKLTLDY GIREQLLGAN QHIHILQLTR
EATLNAIKHA NASEIVIQCA KNNEGMINIS VSDDGVGIEH LKERDQHFGI GIMHERASKL
EGQLRFSSNE AGGTTVTLTL PPHQESSQHG
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