Gene Sama_0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0645 
Symbol 
ID4602898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp800875 
End bp801249 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content57% 
IMG OID639779980 
Producthypothetical protein 
Protein accessionYP_926523 
Protein GI119773783 
COG category[S] Function unknown 
COG ID[COG3112] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00602467 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTACG AATTTCGCCG CAACGGCCTG GATGGTTCCG TGATGGCTCG TTTCAGCATG 
GAACATGAGG TGATGGGGCG ATGGTTTGGT GAAGAGCTGG GTGACAAGCC CGCTGCTACG
GCAGCTGTAT TAACGGCTAT TGCCGCGATT CAGGCCGGGG AGCTGCGTGA GTGGCGCTTG
ACGGGCCGGG AATTCAGCCT GGAGCTGGAT GAAGAGCAAG CCAGGGTCTA TGCCAACGTG
CTGGGGTATG ACAACCAGGA TGAGCTGGAC GATGGCATGT CCCTTTACGA TGCAGAGCTT
GAGGCCAGCT GTGGCCTCGA AGATTTAGAA GCCGCCCTGC AAAGCTGGCA GGCATTTTTA
GTTGAAACCC GCTGA
 
Protein sequence
MEYEFRRNGL DGSVMARFSM EHEVMGRWFG EELGDKPAAT AAVLTAIAAI QAGELREWRL 
TGREFSLELD EEQARVYANV LGYDNQDELD DGMSLYDAEL EASCGLEDLE AALQSWQAFL
VETR