| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0637 |
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| Symbol | |
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| ID | 4602890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 793459 |
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| End bp | 794064 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779972 |
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| Product | hypothetical protein |
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| Protein accession | YP_926515 |
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| Protein GI | 119773775 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
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| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0353203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.98697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTGA CTATGAAACA CTTCAAACTG ATTTTCATCC TGGCAGCGTC CCTTGGCCTG
GGCGCCTGTC AATCCAGGGT TGAGTACGGA GACGCCACCG AAGTGGAAAC GGTGAATGAG
AACTTCGGTT CCACCGATCT GCAGGCCATT ACCGCCAAGA TGGTGGACAG CATGCTGACC
TTCCCGCCAG TGGTCGCCAT GACTGCCAAA CAACGTCCCA TCATCTTCGT GGACAAAATC
AAAAACAAAA CCTCAGAGCA CATAGATACC GAGTCAGTGA CCGACTCCAT CAGCAACAAG
CTGCTGCGCT CCGGCAAGTT CCGCTTTATC GATATGACCA AGGTGGATGC CGTTCGTAAG
CAGTTGGATT ACCAAAACAA CTCAGGCATG GTTGACCCAT CAACAGCCAT CCGCTTTGGA
CGCCAAATCG GCGCCCAGTA CATGCTCTAT GGCAACCTGT CCAGTATCGT CAAGCAGGAA
GGCAGCACCA AGGATGTGTA CTACAAGATG ACCATGCGTC TGATGGATCT GGAAACCGGC
CTTATCGAAT GGTCCGATGA AAAAGAAATT CGCAAGACCA AGTCCAAGTC ATTTCTCGGC
ATGTAA
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| Protein sequence | MELTMKHFKL IFILAASLGL GACQSRVEYG DATEVETVNE NFGSTDLQAI TAKMVDSMLT
FPPVVAMTAK QRPIIFVDKI KNKTSEHIDT ESVTDSISNK LLRSGKFRFI DMTKVDAVRK
QLDYQNNSGM VDPSTAIRFG RQIGAQYMLY GNLSSIVKQE GSTKDVYYKM TMRLMDLETG
LIEWSDEKEI RKTKSKSFLG M
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