| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0634 |
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| Symbol | |
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| ID | 4602887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 785838 |
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| End bp | 786674 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779969 |
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| Product | outer membrane protein V-like protein |
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| Protein accession | YP_926512 |
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| Protein GI | 119773772 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3713] Outer membrane protein V |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.712948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCC TGATACTGTT TATGCTGATG CTGTCTCTGG CTTTCCCCGT GAAAGCTGAA
GAGTTGCAAA CAGTGACACC GGGAGACTGG CAGGTCTCGC TGGCCCTTGG CTATGGAATA
CTGGAAAACC CCCGCAAAAA AACCGAAGAC ATCACCACCT ATGTGCTGCC AAGCTGGTAT
TACTACGGCG AAGACTTTTA CGTTGAGAAT TTCACCCTGG GATACAGCCT CTACGAAACC
GACTGGTTGA GCGTGGACGT ACAAGGGCAG TTAAACGATG ACGGTATCTA TTTTGAGTAC
GATGGATTTG GCAAGTTATT ACTGTCGGAT ATCCTCGGCT ACAAACCCAA TACCGGTCCC
ATTGTTCGTC CGGGGGTTGA GCCACCCAAA CTTGAGCCGG TAGAGCGCAA TCTGTCTTAT
CTCGGCGGTC TGAGCGCGAC CTGGTACACG CCTGTGTTCG ACCTGACCAC TGGTGTGTTT
TACGACGTCA CCGGTGTACA CAACGGCTAC GAATGGCAAC TCAGTGCCAG AAAGTCCTTC
GCCTGGTCTT GGGGCGCCGC AGGCATAGAG ATTGGCGGCG TGTATAAGAG TGCCGATTTG
GTGGACTACT ACTACAATGT GACGCAAGCA GAGTCCGGCG CCAGACGCCC ACCCAAGCCG
CTTGAGGCGG CCACCAATTG GCACGTTAAA GGCGTGCTGA ATATTCCCCT GAGCGACAGT
CTGAACTTTA TTCTCACTGT CAATCATACC CGCCTGGGTA AAGCCATTAG AGAGAGCGCT
CTGATAGAAA GAGACGATCT TTTCTCGGGT TTTGCCGGCG TCAGCTACAG TTTCTAG
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| Protein sequence | MKPLILFMLM LSLAFPVKAE ELQTVTPGDW QVSLALGYGI LENPRKKTED ITTYVLPSWY
YYGEDFYVEN FTLGYSLYET DWLSVDVQGQ LNDDGIYFEY DGFGKLLLSD ILGYKPNTGP
IVRPGVEPPK LEPVERNLSY LGGLSATWYT PVFDLTTGVF YDVTGVHNGY EWQLSARKSF
AWSWGAAGIE IGGVYKSADL VDYYYNVTQA ESGARRPPKP LEAATNWHVK GVLNIPLSDS
LNFILTVNHT RLGKAIRESA LIERDDLFSG FAGVSYSF
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