| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0617 |
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| Symbol | |
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| ID | 4602870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 770595 |
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| End bp | 771164 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639779952 |
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| Product | alkyl hydroperoxide reductase, C subunit |
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| Protein accession | YP_926495 |
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| Protein GI | 119773755 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.268345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCAAT CCATCATCAA CAGCACCATC AAGCCATTCA AAGCCACTGC TTTCCACAAG
GGCGAATTCG TGCCTGTGAC CGAGCAGGAT CTACTGGGCA AGTGGTCTGT GGTGTTCTTC
TACCCAGCCG ACTTCACTTT CGTATGTCCA ACTGAACTGG GCGACATGGC TGACCATTAT
GCCAAGCTGC AGTCCATGGG CGTTGAAGTG TACTCAGTGT CTACCGACAC CCACTTCACC
CACAAGGCAT GGCACGACAC TTCTGACACC ATCAACAAGA TTGAATTCCC AATGGTGGCT
GACCCAACCG GTATCATCAG CCGTAACTTC GGTGTGATGA TTGAAGAAGA AGGTCTGGCT
CTGCGTGGTA CCTTCGTAAT CAACCCAGAA GGTCAGGTAA AAGTGGCTGA GATCCACGAC
CTGGGCATCG GCCGCAGCGC CAGCGAGCTG GTTCGTAAAA TTCAGGCTGC CCAGTACGTT
GCTACTCACG ATGGCGAAGT TTGCCCAGCC AAGTGGCAGC CAGGTGATGA AACTCTGGCT
CCATCTCTGG ACCTGGTTGG CAAAATCTAA
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| Protein sequence | MTQSIINSTI KPFKATAFHK GEFVPVTEQD LLGKWSVVFF YPADFTFVCP TELGDMADHY
AKLQSMGVEV YSVSTDTHFT HKAWHDTSDT INKIEFPMVA DPTGIISRNF GVMIEEEGLA
LRGTFVINPE GQVKVAEIHD LGIGRSASEL VRKIQAAQYV ATHDGEVCPA KWQPGDETLA
PSLDLVGKI
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