Gene Sama_0609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0609 
Symbol 
ID4602862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp762136 
End bp762660 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content51% 
IMG OID639779944 
Producthypothetical protein 
Protein accessionYP_926487 
Protein GI119773747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.60962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGA CACCCTCATC ACTTTTCAAT GCGTATCCAG ATTGGTTTAC CCGGGCAACG 
CCCCTGAGGG TGCTTGATTT AGCCTGTGGT TCAGGCCGTA ATGGCGTCTG GTTTCTGGAG
CGAGGGCATC ATGTGACTTT TGTCGATCTG GATACCAGTG CACTGCCACC AGAGATAAAG
CACGATCCAC TCGCCCACAT CTTCCAACTG GATTTGGAGC AAGGGGATAC TGTGCCACTG
GGGCAGTTTG ACATGGTATT GGTATTCAAT TACTTGCACA GGCCGCTCAT ACCATGGATC
AAAGATTCAG TGTTACCTGG CGGTCTGGTG GTCTATGAAA CCTTCACCGA AGCCCAAGCC
AGTATCGGCA GACCCAAAAA TCCAGCGTTC CTGCTGGGCA AAAACGAACT CAGAGAACGC
TTTACTGACT GGGAACAAGT GTATTATCGT GAGGAAACAC CCGCGACTCC CGCTGGCAGC
GGCGCCTATA AAGCCACGAT AATCTGCCGT AAACCTCTGG ATTAA
 
Protein sequence
MTLTPSSLFN AYPDWFTRAT PLRVLDLACG SGRNGVWFLE RGHHVTFVDL DTSALPPEIK 
HDPLAHIFQL DLEQGDTVPL GQFDMVLVFN YLHRPLIPWI KDSVLPGGLV VYETFTEAQA
SIGRPKNPAF LLGKNELRER FTDWEQVYYR EETPATPAGS GAYKATIICR KPLD