Gene Sama_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0593 
Symbol 
ID4602846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp743359 
End bp744024 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content57% 
IMG OID639779928 
Producthypothetical protein 
Protein accessionYP_926471 
Protein GI119773731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.837907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0115721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGG CAAACTTTTC AGGAATTGGT ACAGGTCTTG TGGGTCATGG CGCCCTGATC 
GAACGGCTGC TGCGGGGCGA GTTTATTTGC CGCGTGACTG ACGAAGACGG CTGGCGTGCG
CTCAAGTCGC CTGCCGTGCG CGAGCGTATC GAAACCTACC TCAACCAAAT CAACCGCACT
GTTGCCAGCG CCGGTGAAGG CGAGGTGTTC TTTTGCGGTT ATGCCCAGTT GGGTGAGGCC
GAGCGCAAGG TGATTTCCAG CCAGTTCAAG GATATCTGCC AGGCGCTCAT TCCGCTGGTG
GAGTGGCTCG TGTTGGTGCA GGAGGCCTCC GGCCAGGATA CGCCCCTCAC CGAAGGTGCA
CCAGTGCGTT TGACTGAGCT TCAGGGCCGT ATCGAAGAGA CCCCGGCGTT TCGCGAGCAG
CTTGGCAAAC TCAGCCAGTA CCGGCTTTTT GGCTCCACTT CAAGTAACGT CGATGCCCAG
CTTAAGCTGG TGTTCAAGCG TCTGGTGGAG CTTGGCTTCC TTACTCGCCC CAATGTGGAA
AAACAAATCT ACATCGCCAC GGGTAAGCTT GATTATCTCT ATGAAGTGAT TCGCTTTATC
GATGAAACTG AAGGGCTGAA CCTGGAGGCG CAGGCCGAAA CCGCCACCCA GAGGGAGCTG
ATATGA
 
Protein sequence
MSEANFSGIG TGLVGHGALI ERLLRGEFIC RVTDEDGWRA LKSPAVRERI ETYLNQINRT 
VASAGEGEVF FCGYAQLGEA ERKVISSQFK DICQALIPLV EWLVLVQEAS GQDTPLTEGA
PVRLTELQGR IEETPAFREQ LGKLSQYRLF GSTSSNVDAQ LKLVFKRLVE LGFLTRPNVE
KQIYIATGKL DYLYEVIRFI DETEGLNLEA QAETATQREL I