Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0593 |
Symbol | |
ID | 4602846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 743359 |
End bp | 744024 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639779928 |
Product | hypothetical protein |
Protein accession | YP_926471 |
Protein GI | 119773731 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.837907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0115721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAGG CAAACTTTTC AGGAATTGGT ACAGGTCTTG TGGGTCATGG CGCCCTGATC GAACGGCTGC TGCGGGGCGA GTTTATTTGC CGCGTGACTG ACGAAGACGG CTGGCGTGCG CTCAAGTCGC CTGCCGTGCG CGAGCGTATC GAAACCTACC TCAACCAAAT CAACCGCACT GTTGCCAGCG CCGGTGAAGG CGAGGTGTTC TTTTGCGGTT ATGCCCAGTT GGGTGAGGCC GAGCGCAAGG TGATTTCCAG CCAGTTCAAG GATATCTGCC AGGCGCTCAT TCCGCTGGTG GAGTGGCTCG TGTTGGTGCA GGAGGCCTCC GGCCAGGATA CGCCCCTCAC CGAAGGTGCA CCAGTGCGTT TGACTGAGCT TCAGGGCCGT ATCGAAGAGA CCCCGGCGTT TCGCGAGCAG CTTGGCAAAC TCAGCCAGTA CCGGCTTTTT GGCTCCACTT CAAGTAACGT CGATGCCCAG CTTAAGCTGG TGTTCAAGCG TCTGGTGGAG CTTGGCTTCC TTACTCGCCC CAATGTGGAA AAACAAATCT ACATCGCCAC GGGTAAGCTT GATTATCTCT ATGAAGTGAT TCGCTTTATC GATGAAACTG AAGGGCTGAA CCTGGAGGCG CAGGCCGAAA CCGCCACCCA GAGGGAGCTG ATATGA
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Protein sequence | MSEANFSGIG TGLVGHGALI ERLLRGEFIC RVTDEDGWRA LKSPAVRERI ETYLNQINRT VASAGEGEVF FCGYAQLGEA ERKVISSQFK DICQALIPLV EWLVLVQEAS GQDTPLTEGA PVRLTELQGR IEETPAFREQ LGKLSQYRLF GSTSSNVDAQ LKLVFKRLVE LGFLTRPNVE KQIYIATGKL DYLYEVIRFI DETEGLNLEA QAETATQREL I
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