| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0574 |
|---|
| Symbol | |
|---|
| ID | 4602827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 715316 |
|---|
| End bp | 716266 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639779909 |
|---|
| Product | glutathione synthetase |
|---|
| Protein accession | YP_926452 |
|---|
| Protein GI | 119773712 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | [TIGR01380] glutathione synthetase, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000193905 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.212613 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAC TCGGCATAGT GATGGACCCC ATCAGCGACA TCAACATCAA GAAAGACTCC
AGCTTTGCCA TGCTGATGGC CGCCCAAAGT CGCGGCTATG AGCTGTTTTA TATGGAAATG
CAGGACCTGG CCATGGTCAA GGGTGAGGCC CGCGCCCGCA TGCATCCCCT CAAGGTAATG
CAGAACGCCG ATTGCTGGTT TGAATTGGGC GATGCAGTTG AGCAGCCGCT GGCCGAGCTT
GATGTCATCC TGATGCGTAA AGACCCGCCA TTCGACACCG AATATATTTA CGCCACTTAT
ATGTTGGAAC GCGCCGAAGA GGCGGGCGTG TTGATTGTCA ACAAGCCCCA GAGCCTGCGG
GACGCCAACG AAAAGCTGTT TACCGCCTGG TTCAGCGAGT TTACTCCACT GACCATGGTC
ACCCGCGATG CTGGCCGCAT CCGTGAGTTC CACGCCGAGC ATGGTGACAT TATCTTAAAG
CCGCTGGATG GCATGGGCGG CGCCTCTATC TTTCGCGTCA AACAGGACGA CCCGAACCTT
GGCGTCATCA TAGAAACCCT CACCAACCAC GGTAATTGCT ACGCCATGGC TCAGGTGTTT
ATTCCTGAAA TCACCGCGGG CGACAAACGT ATTCTGGTGG TGGATGGTGA GCCAGTTCCA
TATTGCCTGG CCCGTATCCC CAAGCAGGGT GAAACCCGGG GTAATCTTGC TGCCGGTGGC
CGTGGAGTAG CACAGCCGCT GTCTGACGCC GACTGGCGCA TTGCCAAGGC TCTGGGGCCG
GAACTCAAGC GCCGGGGTCT GATTTTTGTG GGTCTGGACG TGATTGGCGA TAAACTCACC
GAAATCAACG TGACCAGCCC GACCTGTATC CGCGAAATCG AAGCGGCCTT CGACGTGGAT
ATCACGGGCA TGCTGATGAA CGCCATCGAA GCCCGTATCA ACAAGAAATA A
|
|---|
| Protein sequence | MIKLGIVMDP ISDINIKKDS SFAMLMAAQS RGYELFYMEM QDLAMVKGEA RARMHPLKVM
QNADCWFELG DAVEQPLAEL DVILMRKDPP FDTEYIYATY MLERAEEAGV LIVNKPQSLR
DANEKLFTAW FSEFTPLTMV TRDAGRIREF HAEHGDIILK PLDGMGGASI FRVKQDDPNL
GVIIETLTNH GNCYAMAQVF IPEITAGDKR ILVVDGEPVP YCLARIPKQG ETRGNLAAGG
RGVAQPLSDA DWRIAKALGP ELKRRGLIFV GLDVIGDKLT EINVTSPTCI REIEAAFDVD
ITGMLMNAIE ARINKK
|
|---|
| |