| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0568 |
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| Symbol | |
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| ID | 4602821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 706662 |
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| End bp | 708332 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779903 |
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| Product | hypothetical protein |
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| Protein accession | YP_926446 |
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| Protein GI | 119773706 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.235837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGCTC CAGAACTGCT CGAATTGAGC GAAGATGGCA TAAAAGCGGA ACTCAGGCTG
ATCCCCGCAA CACACGGCCC TGTCAGCGAA AATGATTTGA GGGAGCTCTT GGCCCTGCCC
GGCTTTGCCG AACTTTGCCC ACTCGAACCC GTTATCCAAA AGGCTGTCAT CAGCATCAAT
AAGCTCTGTG GTCAGGATGA TGGCAAATTT GAGCAATTTT TTGCCATCGC GGAGCGTCGC
AATGGCAAGG TCGTCATCGA GGTCAGCCCG GATCAAATGC AGGCTGAAAT GGAGATTGTC
GCCGCCTATG GCGGTAAACA AATTAGCCTG CAGGATGTCT TGGTGGCTCT GAAGGCCGAA
GGCGTTTCCA TGGGGCTCAG TAAGGTGCGT ATTGAGCAGC TGCTGAAACA AATTCCCACC
CTTGCCCCCG GTGCCAGTTG CAAACAGGTC ATTGCCATCG GTAAGCCTGC GGTCAACGGT
GAAAACGCGA TACTCGACCG CAAAGTCCCA TTAGCGAGGG AGCGTTTGCT GCAGCCACAG
GAGCGGGAAG ACGGCACCGT GGATATGCGA AACCTGGGCT CGGTTATCAC GGTTAAACCC
AACGATGTCC TGATGGTTAA GATCCCGGCG ACCGATGGCA TACAGGGCTT TACCGTGAAA
GGTACTCCCC TGCCGCCAAT CCCAGGAAAA GACCTGCCTT TAGTCCCCGG TGACGGTACG
GCGCTCTCGC CCAAAGATCC CCATAAATTA ATTGCCACTG TGGCAGGTCA GCCGGTTGAA
ACCCGCACCG GCATGCAAGT GGATGACATG TTGCAAATCA AAGAAGTGGA TGTGAAGTAC
GGCCACGTCA ACTTTAAGGG CTCTGTGTTA ATTACGGGCG ATGTGCATGA AGGCATGCAG
GTAAGAGCCA GTGGTGACAT TACCGTGATG GGTTTTGTCG ACTCGGCTCA GCTGGAGGCT
GAAGGCGACA TCATCGTCAG TAAAGGGGTT ATTGGCCGCC AACTGGCCGA TAACAAACAC
TCCACAGTGC TCAAGGCCAA GGGCCAGATT GCCGCTCAGT TTGTACAATA CTCAGAACTC
GTGGCCGAAG GCGATATTCA GGTGACCAAA CAGTTGCTGC ACAGCAACAC CACCACCCTG
AGTAAACTGC TGGTCAGTGA CAATAATGGT CGCCGGGGCG ATTTGGTCGG CGGGCAGGCC
CATGCAGCCA AGGGGGTGCG CGCCGTCGTC ATAGGCGCTA CCGCAGGCAC CAAGACAGAA
ATCTTCTGCG CCATGGATTT GAGCGACTTG AAAAACGAAC TCAGGGCGCT GGATGAGAGC
GTCAAGTCCA TGGTGGTTGC CTGTCTCGAC ATTGACGCCC GGATCCGCAA ACTGCCACCC
AAGAGCGAAT GGCAGGATGA TCCCGTTATG CTAGAACAGG TGCGTATGAT GATGGAGCAG
AAAAAGCGCA TGTCAGAAGA ACGCGTTCTG GAAGAACAGC GATTTGAAGC CCTCAAACAG
GAAGTTGATA ATTACTATGC CAATTATCGG GTAGAAGTGC TTAAACACAT TTTTGCCAAC
GTCGAGCTTC ATATAGGTCA GGCCTTTAAC CGCACCCAAA GGGAACACGG CACCTGTATA
GTCACCAATC AGGGGCAGGA AGTGTACTTC GATTACAGTG CCAAGCCCTG A
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| Protein sequence | MLAPELLELS EDGIKAELRL IPATHGPVSE NDLRELLALP GFAELCPLEP VIQKAVISIN
KLCGQDDGKF EQFFAIAERR NGKVVIEVSP DQMQAEMEIV AAYGGKQISL QDVLVALKAE
GVSMGLSKVR IEQLLKQIPT LAPGASCKQV IAIGKPAVNG ENAILDRKVP LARERLLQPQ
EREDGTVDMR NLGSVITVKP NDVLMVKIPA TDGIQGFTVK GTPLPPIPGK DLPLVPGDGT
ALSPKDPHKL IATVAGQPVE TRTGMQVDDM LQIKEVDVKY GHVNFKGSVL ITGDVHEGMQ
VRASGDITVM GFVDSAQLEA EGDIIVSKGV IGRQLADNKH STVLKAKGQI AAQFVQYSEL
VAEGDIQVTK QLLHSNTTTL SKLLVSDNNG RRGDLVGGQA HAAKGVRAVV IGATAGTKTE
IFCAMDLSDL KNELRALDES VKSMVVACLD IDARIRKLPP KSEWQDDPVM LEQVRMMMEQ
KKRMSEERVL EEQRFEALKQ EVDNYYANYR VEVLKHIFAN VELHIGQAFN RTQREHGTCI
VTNQGQEVYF DYSAKP
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