| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0563 |
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| Symbol | |
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| ID | 4602816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 698929 |
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| End bp | 701478 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639779898 |
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| Product | alpha-1,2-mannosidase family protein |
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| Protein accession | YP_926441 |
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| Protein GI | 119773701 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
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| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.372368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.251569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATAC CTCGTACCCT CATCGGCATC GCCGTTTCTG CCGCGCTTGG CGCCATCTCG
CTCAGTGGCT GCAGCAGCGA AGCCGATACA AATCGAAACC AGCAGGCCAA CCCGGCGACT
ACTGCCGTTA ACGCTACTAC CAATGCTAAC GCAACGGCCC CCAACTGGAT TAAACAGCCG
GTGGACTTTG TTGACCCTTT GATTGGCAGC CAGGGGGTAT TCAACCATCG CCAGGCCGCC
AACGTGGCTG TGGGCGCCTC ACTGCCCTTT GGCATGTTCA ACTTTGGTCC CGAGCACGCC
TATACCGAGG CGCTGCTGAA TGAAAGTGAA GGGCTGAAAA AGCGGGTGCT GGAAGAAAAG
GTACGCATTC CTGTCTCCCC CGGCGGTTAC AACTACGATG CCACCCGCGT TAAGGGTTTC
AGCTTTACCC GCCTGTCAGG CACCGGCTGC CTTGGCGCCT CCGGCGAAGT GCCTGTGCTG
CCTTTTTTAG AGCCTATCAA GCATTCACCC GACACAGACC TGATGGACAC TTACTACAGC
GTGGGTTACA GCCACGCCAA TGAAAGTGTG CGCCCGGGCA GCTACCGCAT CACCCTGGAT
AACGGCGTTG GTGTGAATTT AAGCGCCACG GAGCGCAGCG GCATCGCTGA GTTTGCCTTC
CCCAAAGACG CCGCCGCCAA ACTGCTGTTT CGCACCGCCT ATAACCAGCT TGGCAGCGAA
AAGGCAAGCA CCCGCTTTCA CCCCGAGACC GGTGAAATCA CAGGCTCAGT TACCAGCGGT
AACTTCTGCG GCTATTTGGG TGAAGCCAAC CGCTACAGCT ATTACACCCT GCACTTTGTC
GCCAAACTCG ATGTACCTGT GACCTCCAGC GGCGGCTGGC AGGATGACAA GATGCGGCCC
GGCGCCAGCT ACAGCGAGGG CGGTACCGGC TATGGCCCCA AGGGCGTCCC CGAATTGGGC
AAGGGTTCAG GCCTGTGGCT TGAGCTGGAT ACCTCAGTGC AGCAAAAGGT CACCATGCGG
GTGGGTATCT CTTACGTAAG TGAAGCCAAT GCCCGCCAAA ATCTGATTGC CGAGCAGGCC
CATAAGGACT TTGCCGCGGT GGAAGCGGCG GCCAATCAAC GCTGGAACGA TACCCTCGCC
AAGGTCGCCG TTGCTGCCGA CCCCGTGGAT GCCAAAAACC GGCTGACCAC CTTTTACACC
GCGCTTTACC ATGCCCTGCA CCACCCTAAT CTGTTCAGTG ACGTCAATGG CGAGTACACC
GGCTTCGATG GCACGGTACA CCGCCTGAGT CAGGGCCAGC AGGCACAATA CGCCAACTAT
TCGCTGTGGG ATGTGTATCG CTCGCAGCTG CAACTTATCA GCCTGATGGA GCCCAAAGTT
GGCTCCGACA TGGCCCAGTC GATGCTCAAT CAGGCCAATC AATACGGCGG TGTGTGGGAC
AGATGGACCC ACAATTCAGG ACCCACCTCG GTGATGTCCG GCGATCCTTC CACCATCGCC
ATTGCCAATT TTGTCGCCTT TGGCGCCGAT GACTTTGCCG TCAAAGAGGC CTATCAGTCA
CTGTACAAGG CTGCTACCGA GCCGACCCAG TTTGACCTTG GCAACACCGG CTGCCCGGTG
TTCTGCCGAG GTCAGCGCCC GTCGCTGGAT CAGTGGCTGT CGCTCAATTA CATTTCCGAC
CAATCCAATA GCTGGGAAGG CGCCAGCGAA ACCCTGGAGC AGGTGAGCGC CGATTTCGCC
CTCTCGCAGC TGGCGGCACG TCTTGGCAAG CAAAGCCAGA GCGACGAGAT GCTCGCCCGC
GCCGGCTACT GGAAAAACCT CTACAACCCC AAAGCCACCG ACAAGCTGGG CTACATTCAG
GGCCGTAACA AAGATGGCAG CTGGAAGGCA GACTTTGATC CCGCAAGCCC GCATCTCTTT
GTCGAAGGCA GCCCGGCTCA GTATCTGTGG ATGCTGCCCT TTGATGGTGC CGGCATGTCA
GCACTGCTCG GCGGTGATGC GGCTATGGAA GCGCGACTCG ATAGCCACTT TATCAAGCCC
GATGGCAGCT ATGTGCTGTT TCGCGATGAT GCCTTTTATG CCGATGTGTC CAATCAGCCG
TCCATCAACA GCCCCTGGAT GTACCTGCAT ACAGGCGCCG CCTATAAAAC CCAGAAGGTA
GTGCGCGAAA CCCTGAACAC CCTGTGGCTG CCAACGCCAA AAGGCATTCC CGGGCAGGAC
GATTTGGGAC AGATGTCATC CTGGTACGTG TTTTCGGCAC TCGGGCTTTA CCCCATGCTG
CCGGGCCGCG CCGAACTGGT ACTGGCCGCC CCCGTGTTTG AAGCGGCCGA GATTGGCAAG
CTCAGCATTC GCGCGCCCGG CGCCAGCAAC GACAGGCTCT ATATCGATGA AGTAGTGCTT
AATGGCCATC CAAACCTGAA GAGCTTTATT TCGCCGGAGT ATATAGACCA CAAAACCAGT
CTGGAATTTA AGCTCAGCGA TAAGCCAAAC CCGGCCTTTG GTCAGGCCAA AACTGACCGT
CCTCCTTCAT TTTCACTGAC AGGGAACTAA
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| Protein sequence | MHIPRTLIGI AVSAALGAIS LSGCSSEADT NRNQQANPAT TAVNATTNAN ATAPNWIKQP
VDFVDPLIGS QGVFNHRQAA NVAVGASLPF GMFNFGPEHA YTEALLNESE GLKKRVLEEK
VRIPVSPGGY NYDATRVKGF SFTRLSGTGC LGASGEVPVL PFLEPIKHSP DTDLMDTYYS
VGYSHANESV RPGSYRITLD NGVGVNLSAT ERSGIAEFAF PKDAAAKLLF RTAYNQLGSE
KASTRFHPET GEITGSVTSG NFCGYLGEAN RYSYYTLHFV AKLDVPVTSS GGWQDDKMRP
GASYSEGGTG YGPKGVPELG KGSGLWLELD TSVQQKVTMR VGISYVSEAN ARQNLIAEQA
HKDFAAVEAA ANQRWNDTLA KVAVAADPVD AKNRLTTFYT ALYHALHHPN LFSDVNGEYT
GFDGTVHRLS QGQQAQYANY SLWDVYRSQL QLISLMEPKV GSDMAQSMLN QANQYGGVWD
RWTHNSGPTS VMSGDPSTIA IANFVAFGAD DFAVKEAYQS LYKAATEPTQ FDLGNTGCPV
FCRGQRPSLD QWLSLNYISD QSNSWEGASE TLEQVSADFA LSQLAARLGK QSQSDEMLAR
AGYWKNLYNP KATDKLGYIQ GRNKDGSWKA DFDPASPHLF VEGSPAQYLW MLPFDGAGMS
ALLGGDAAME ARLDSHFIKP DGSYVLFRDD AFYADVSNQP SINSPWMYLH TGAAYKTQKV
VRETLNTLWL PTPKGIPGQD DLGQMSSWYV FSALGLYPML PGRAELVLAA PVFEAAEIGK
LSIRAPGASN DRLYIDEVVL NGHPNLKSFI SPEYIDHKTS LEFKLSDKPN PAFGQAKTDR
PPSFSLTGN
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