| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0556 |
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| Symbol | |
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| ID | 4602810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 688759 |
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| End bp | 692544 |
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| Gene Length | 3786 bp |
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| Protein Length | 1261 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779892 |
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| Product | hypothetical protein |
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| Protein accession | YP_926435 |
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| Protein GI | 119773695 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.170539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.101449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTTTA AATCATCTTC GGTCGCATTG TTAATTTCCT CGCTGCTGGC ATGCCAGGTG
CACGCCCGCG CTATCTCAAA TACTGATGCG TTGTCAGTAT TCGGAAGTCA TCAACACCGC
GCCAATTCAC AATCCGATGC CATGGCATCA TTTACACGAA TTAACGAGCT CAAGGGTATT
TATATTCTTC AGCTGTCAGA AAAGAGTGCC CTGGATAAGA GTTATGCGGC ACTGGGTGAC
AAGCGTTCCT CGGTCCTGTC CAAAATTGAT GCACAACAAA ATCGCATTAT TGCTGCAATC
TACGCCCTGG ACACCGAAGC AGTCATCGTC CAGAAAGTAC GCATTGTCGA CAATGCCATC
CATGTACAAA TGACTCATGC TGCAGCAAAC GCGTTGGCAG ATAACGATGA AATTGCCAGT
ATTGTCGAAA CCTCCGCGCA GCCAAACCTA ACGCAGGCTG ACGAATTCAA ACCCTATCCA
TTTTTAACCG TAAAAGACCC GGGAGATAGC GTCACTGTCG CCATCATTGG TAATGGTGTG
GATTATACCC ATAAAGATCT GGGCGGTGCG GGCACGCCGG AGGCTTACGA ACAGGCCTGG
AAAAACAATC ACAACGCCTG GGACGGTTTC CCAACTGATA CCGTTATTGG CGGCTTGGAC
TTTTCTGCCA ATTATGAGGG TTACCATACT GTCGACTACA ACCCGATAGA AAATCAGGAT
GACGAAGCTG CAAGCAATCA TACCTATCAC TATCCATCGG GAACAGCCCA GGCCGCGTTG
GTGCTTAAGC AAGCGCCTGA AGCCAAAATT CTGGCTTACA AAACCCTGGA TTATGACTGG
AACTATTTTT ACGCCGCACT GGATGTGGTG GTTGACCCCA ACCAGGATGG CGATTTCAGC
GATCGTCCGG ACATTGTACT GATCAACTCG TTTGGTGGCG GCGCATTTTA CCAAAAGAAA
GGTTCAGGAA CTTCATACGA AACCCTGCAG ATTGACCACA TCCGCCGCCT CGCAGGCCTG
GGCTCACTCA TTGTCGCCCC TGCCGGAACC TTCTACCTCG ACAGCTACTA CAGCATGGCA
CCTCTGGGGG CGACCCCTGA GGCATTGACG GTTGGTTCGG TCAGAATGGA GCAAGATGCG
CTGTATCTTT CATCCTTCAC CCCTGCAGGT CCAACCCGCG GCGATACCCT GTTGAAACCC
GATGTGGTTG CCCTGGCAGA AGGCTTTGAC GGTGCCCTAG TGGGGACTGG CGATAAAAGT
GGTGAGCTTG CCCAAACCAC GGCTTATGCT GCAGCCAACG CAGCCGGTAT TGCAGCTCGC
GTATGGCAAA GAGAACGTAA TCTCAGCGCC CTTGAAGTAA AAGCCCTGGT GGCCAATACC
GCGATTGCAG ATGGTATTTC CGGGATTAAA GAAACTGTGG TTGAACAAGC GTTCTCCATT
GACGTGACCA AGGTGGCGGA AGTCCCATTT ATGGGCACAG GCATGGTCAA CGCGGACAAC
ATCGACAAAG CCAAGTCTGT GCTCTGGGAA ACGGGTTCTT ACCAGCCCAG CCTGGCCTTT
GGTTTTATCG AAGCGGCAAG CACCGTCAGC CAAACACGCA ATGTGACGCT GAAAAACCTG
ACTGCTGAAC CACAAACCTA CCGACTGGCT GCCACTAAAA ATGGTGTGAA AGACAACAAT
GCGGCGGTGG AACTGATCTT CCCAGAGTCA GTCAGCGTTC CTGGCAACAG CGCCATTACT
TTCCCGGTAA CACTGACAGT GAACGATAAG CTGCTGTCGC CGTTCCCGAT GAAGAAATCC
AGCGACTTCA CCATTGAAAA GTGGGCCGAA GCCTCGGTAA ACGGTTATCT GACCTTTACC
AATGAAAACA GCGAGGCGAA TGACTCCCTG CTGAAAATGG CCTGGCTGGT ATTGCCCAAA
AAAGCCACAC CGTTTGAAAA ATCAAATGCA ACGCTGAGCT CCAGCACGTC GTATCAATCG
GATGAGTTCA AACAAAAGCT GAGCAGTGCA GGAAGCTACG CTGAATCCTC CAAAATCGAC
ATCACCAATA CCAGCGCCAG TGACCGTACT TTGATCACCA TGCCTTTGAT GCACTACAAG
CATCAACGCA GTGAGGCCAA GACCAATCTG CAAGGGCATA TTATCAAATC GCTCGGAGCG
ACCATTTATG ACATAGATAC CCAGCAATGT GCTTCGGGTA AGGCACTGGG TGTCAGCATT
GAAATGTTCG ATCCCTTTGA ACTGGCCATG GCAGAACACA GAGACAGGTT TGCGGTTCTG
ACCCATTTCC GGATCTACAG CGAATCCTTC TCCGATGCCA ATGGGGACGA TCCTGCCTAC
GCAGAACAAA TTGCACAGGA TGAGGATAAA CTGGCCTACA TGATGATCGA GCTGGATGAC
AACGGTAAAC CAGTGACCAC CTATGTGGAC ATGTCTATCC AATACGATCC CTGGAATCCC
TATGCACGCT ACAAGCAATC CACTCTGGAT ACCTTTGTTT CTCCGGGAGG CAAGATAGCG
GTATCCAATA TCTGCATGGA TGCACTCTAT CGTGAACAAT ACCCAGATCT GACCAGCTGG
AATAAAAAGT TGGGTTGGCA ATTTGGTACC GATCGCGATG CTGTATCAAC CGCTACCGAT
CAGATGCTGC GCTTTAACCC GATACTGAAT GGCGAATACA GCGAGCAAAT CATCGACCAT
ACAGGTGAAG ACGGTTATCC AAACTGGTGG GATTTCAACT GTCAGGCGAC GCAATGGAAT
CCAAATAACT GTATCGAAAG ATCCGTAAAA TTCCTGGCCA GCTCTTCGGC TTCTGCTTTG
CTGCCGGACG ATGTTGCACC TAAAGCGGTA GTCGAACAGG AGCTGACCTG GTCACCGATG
ACGACAATTC CCGCGGGCAA GACCGCCAGG GTAGCAGCCG CCATGACCAT GCAATGCGAT
CCTAATGTGA TCTCCAGTGG CAACTGGGTC ATCGACAAAG ACTGTCCTCC CGGCGTGGCC
ATTTTCGAAT TGGATAACAA CCAAATCGCA AAATTTCCAA CCACCGAAAC CGATGATGTC
AGCACATTGG ATGGCCAAAG CTTCAGTGTT TATGAGAATG CAGCCAATGG TACTGTTGTC
GGTCAGATAA AGACTGTATC ACCCCGATTC TTCGCCAGCG ACGACCTGAA CAAGGCAGAA
ATGTTCTTGC TTAATGCGTT ACCGGGTACG CCTTTTGCGG TGTCCACGAC GGGTGAAATC
ACCGTCATTA ACACGGATGC GCTTGACTAC GAATCGCTCA ACAAGTCCTA CGTGCTGGAA
ATCCAGGTTG ACCACGTCAA TCGCACCAGT GAGCTGGTTA ACGTCACTAT TGACGTCACC
AACAACAATG ACATGGCACC ACAGCAGATT GCGTCCCTTT CAGTAATTGA AGGAACTCAG
GGTACCAGCC TGACTGCCAA CATTTCCAAA GCCTTTATTG ATATCGAAGG TGACGGGATC
TCCTTTATAT CCAATGAATT ACCCGATGGC TTGTTAATCA GCCGAGCGGG CGAAATCAGC
GGTATCCCTG TCGTATCGGG TGAGTTCTCC TCAAACGTGA CCGTAACCGA TGGTATCAAC
CAGATGCAGA CCAGCATCAG TTTTTCCATT GCTTCAAACA GTTCATCTGC ACCTACACAG
CCACCGGTGT CGAGTGAGCC TGCGCAAACG ATTGATAAAG ATGCAGGTTC AGCGGGCGGC
AGCTTCGGTT TCCTGATGTC TTTGTTTGCA GCACTGGCTC TGGCTGCTCG CAGAACACGC
AAGTAA
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| Protein sequence | MVFKSSSVAL LISSLLACQV HARAISNTDA LSVFGSHQHR ANSQSDAMAS FTRINELKGI
YILQLSEKSA LDKSYAALGD KRSSVLSKID AQQNRIIAAI YALDTEAVIV QKVRIVDNAI
HVQMTHAAAN ALADNDEIAS IVETSAQPNL TQADEFKPYP FLTVKDPGDS VTVAIIGNGV
DYTHKDLGGA GTPEAYEQAW KNNHNAWDGF PTDTVIGGLD FSANYEGYHT VDYNPIENQD
DEAASNHTYH YPSGTAQAAL VLKQAPEAKI LAYKTLDYDW NYFYAALDVV VDPNQDGDFS
DRPDIVLINS FGGGAFYQKK GSGTSYETLQ IDHIRRLAGL GSLIVAPAGT FYLDSYYSMA
PLGATPEALT VGSVRMEQDA LYLSSFTPAG PTRGDTLLKP DVVALAEGFD GALVGTGDKS
GELAQTTAYA AANAAGIAAR VWQRERNLSA LEVKALVANT AIADGISGIK ETVVEQAFSI
DVTKVAEVPF MGTGMVNADN IDKAKSVLWE TGSYQPSLAF GFIEAASTVS QTRNVTLKNL
TAEPQTYRLA ATKNGVKDNN AAVELIFPES VSVPGNSAIT FPVTLTVNDK LLSPFPMKKS
SDFTIEKWAE ASVNGYLTFT NENSEANDSL LKMAWLVLPK KATPFEKSNA TLSSSTSYQS
DEFKQKLSSA GSYAESSKID ITNTSASDRT LITMPLMHYK HQRSEAKTNL QGHIIKSLGA
TIYDIDTQQC ASGKALGVSI EMFDPFELAM AEHRDRFAVL THFRIYSESF SDANGDDPAY
AEQIAQDEDK LAYMMIELDD NGKPVTTYVD MSIQYDPWNP YARYKQSTLD TFVSPGGKIA
VSNICMDALY REQYPDLTSW NKKLGWQFGT DRDAVSTATD QMLRFNPILN GEYSEQIIDH
TGEDGYPNWW DFNCQATQWN PNNCIERSVK FLASSSASAL LPDDVAPKAV VEQELTWSPM
TTIPAGKTAR VAAAMTMQCD PNVISSGNWV IDKDCPPGVA IFELDNNQIA KFPTTETDDV
STLDGQSFSV YENAANGTVV GQIKTVSPRF FASDDLNKAE MFLLNALPGT PFAVSTTGEI
TVINTDALDY ESLNKSYVLE IQVDHVNRTS ELVNVTIDVT NNNDMAPQQI ASLSVIEGTQ
GTSLTANISK AFIDIEGDGI SFISNELPDG LLISRAGEIS GIPVVSGEFS SNVTVTDGIN
QMQTSISFSI ASNSSSAPTQ PPVSSEPAQT IDKDAGSAGG SFGFLMSLFA ALALAARRTR
K
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