| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0547 |
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| Symbol | |
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| ID | 4602802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 673156 |
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| End bp | 674799 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779883 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_926427 |
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| Protein GI | 119773687 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.562104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0134241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGTT TTTCTCGTCA GGCGGTGAGC AGCAAAATCG GTCGCAGGCT GATGATTTCG
ATCGTGCTGT TCAGCTCGCT TATCACACTC ATCACCACCG GCTATCAGCT GTTTAACGAC
TATAACGGCG ATCTTAACCG TATCGATCGT GCCTTCTCCA ACATCGAGAA AGTTAACCTC
GACGTGCTGG CGGCCAGTAT CTGGGTGATT GATGAGCGCC TTATCAATAC GCAACTCGAA
GGCCTTATCC AGCTGCCCGA CATTACCTAT ATCTCCATCG ATGACGACAG CGGCCAGCAC
TGGAGCCGCG GTGCCCCCAT CGACAAGAAC TTTATTGAGA AGGTGTTTTC CCTAAACTAC
AACTCCGGCA GTGAAAGCAT CTCCGTGGGT AAACTCACTA TCCTGGCCGA CTTGAATGCC
GTGTACGAAC GCATTTATGA CAAGGCCATC ATCATATTGC TCTCCAACGC CATAAAAACC
TTTTTGGTGG CTGGCATGAT CCTTATCCTG GTGTGGCTCA ACATTACCCG CCACCTCAAT
ACTCTGGCAG CCTATTGCCA GGACATCAGC GTAGAACATG AGTATCAGCC ACTGACGTTT
CAAAAGCGCG GTGCTCAAAA TGAGTTCGAT CAGGTCGCCC TGGCAATAAA CGAAATGCAG
GAACAGCTGC ATCGTTCCTT CGGTGCCTTG AAAAAGTCCA AGTCCGACTT GCAACACGCG
CTGGAAGACA GAGAAAGGCT ACTGGAACTG GAGCGCTCGT ATAAGGAAGA ACTCGCCAAG
CAGGTAAAAG AGCGCACCAT GGAGCTGGAA CAGTCGCTGT TAATTCTGAA AAGAGCACAG
GAGGCGCTGG TTGAGCAGGA GAAAATGGCT GCCCTTGGGG GCTTGGTGTC CGGTGTTGCC
CACGAAATCA ACACCCCAAT TGGGATTTGC CTCACCGCTG CCAGTACCCA GTTGGCTCAC
ATCGATGAAC TCATCAGCCT TATTCACAGT GAAGAAGCCA CCCTGGAGGA AATCAACGCC
ATTCTCGAAG AATACCAGCA AAGCTGTGAG CTCATCGTCA GCAATATCAC CCGCGCCAGT
AACCTCATCC AGAAATTCAA AACCATTGCA GCGGAAAACA GCCATGAGGC TCACGAGCAA
ATTCCCATTG CCCAGCTGTG TCGGGACATC CATGACTCCA CACAGCTTAT CTATGCGCCA
ACAATGGCCA ACATGGAACT GGATATTGCC GATGAGCTAC AGGTAGAAAC AAACTACAGT
CTGCTCAACC AGATACTGAG TAATCTGATG TCCAACATCT ATGCCCATGC CTTCGCACAG
GGGCGGGAAA ATCTCTTCCG GGTAGAGGCC TATCTGGAAA ACCGGCGCCT TGTCGTGCGC
CTTGAGGATA ATGGCCCCGG GATCGCCGCT GATGTCGCCG AGCATATGTT TGAGCCATTT
TATACCACCA TCCGCGCCCG GGGAGGCACT GGGCTGGGCT TGTCAGCGGC ATTCAATGCA
GCAACCCTGC TTAAAGGGAG TGTGCGTTAC GAAGGAAAGT CAACTCTGGG GGGGGCCTGC
TTTGTCCTGA GCATCCCGGT AAAACGGGAT GACGATCTGC AGGCCAGCGA CTCAGTCAAA
GACGGGTATC AATTCCATAT CTAG
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| Protein sequence | MLGFSRQAVS SKIGRRLMIS IVLFSSLITL ITTGYQLFND YNGDLNRIDR AFSNIEKVNL
DVLAASIWVI DERLINTQLE GLIQLPDITY ISIDDDSGQH WSRGAPIDKN FIEKVFSLNY
NSGSESISVG KLTILADLNA VYERIYDKAI IILLSNAIKT FLVAGMILIL VWLNITRHLN
TLAAYCQDIS VEHEYQPLTF QKRGAQNEFD QVALAINEMQ EQLHRSFGAL KKSKSDLQHA
LEDRERLLEL ERSYKEELAK QVKERTMELE QSLLILKRAQ EALVEQEKMA ALGGLVSGVA
HEINTPIGIC LTAASTQLAH IDELISLIHS EEATLEEINA ILEEYQQSCE LIVSNITRAS
NLIQKFKTIA AENSHEAHEQ IPIAQLCRDI HDSTQLIYAP TMANMELDIA DELQVETNYS
LLNQILSNLM SNIYAHAFAQ GRENLFRVEA YLENRRLVVR LEDNGPGIAA DVAEHMFEPF
YTTIRARGGT GLGLSAAFNA ATLLKGSVRY EGKSTLGGAC FVLSIPVKRD DDLQASDSVK
DGYQFHI
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