Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0536 |
Symbol | |
ID | 4602791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 660214 |
End bp | 661362 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639779872 |
Product | galactokinase |
Protein accession | YP_926416 |
Protein GI | 119773676 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0153] Galactokinase |
TIGRFAM ID | [TIGR00131] galactokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0132306 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGAACC CTGCGCAGCG CGCCACCAAG CTGTTTGTCC AAACTTTCGG AACCAAGGCC GATGCCTATT ACCAGGCGCC GGGCCGGGTC AATATCATTG GTGAACACAC AGACTATAAC GATGGGTTTG TTCTGCCGGC AGCCATTAAT TTTCATACGG TTATCGCCGT AAAAAAGCGT GAAGATGATC GCTTTCGGGT GGTCACTGAG GCCTTTCCCG GTGAGCTAAG GGAGTGGCGT TTCGGCGAAG AAGGCGAAGT CACTGCCGGT GGTGACTGGG TTAATTACCT TAAAGGTTTC ACCCAGGCAG TGGGCCAGGC CGGACTCAAA GCCAAGGGGC TGGATCTTGC GGTGGTGAGC AGCATCCCCA TGGGAGCAGG CTTTTCATCC TCAGGCGCAC TGGAAATTGC CTTTGGCACG GCCCTGAATG ACACCTGTCA GCTTCACCTT TCCCCCATGG CCATTGCCCA ACTGGCACAG CGCGGCGAGA GCCGTTTCCA CGGCAGTACC TGCGGCGTGA TGGACCATAT GACCAGCGCC CTGGCCGAGG CTGATTCAGC CCTGCTGATT GACTGCCTGG ATCTGGATAT AGAAGCTGTG CTTATTCCGG ATAACCTAAG CCTTATCATC GTGCATTCGC CACTGGACCC CAAGCTACTG GAAGAGGCCT ATAAGGCCCG GGCCGATGAG TGCCGCGATG CCGCCGAATT TTTCGGGCTC GACTCCTTAC GGGACCTGGA ACTGGACGAG CTCAAGGCCG CCAGCGATGT GCTGGACGAA ACCCTCTATA AGCGCGCCCG ACATGTCATA AGCGAAAACC TGCGCACCCA GAGTGCTGGC CGGGCGCTGA AACGCGGTGA TGTCGCCCGC CTGTCTGAAC TGATGGCACT CTCCCATGCC TCGCTTCGGG ATGACTTTGA ACTTATGGTC CCGGAAGTTG AGACTCTGGT GCAAATCATG GCCCAGGCCA TTGGCGACCG TGGCGGTGTC CGTATGACAG ACGGCTGCAG TGTCGTTGCG CTGGTGGAGC ATGATTTGAC CGATGCCGTC GTGCACGCAG TCGAGTCAGA ATACCCTGCC AAAACCGGGC TGGAGCCCGT GCTGTACATG TGTGCCCCAA GCGCAGGTGC AGGACGTATC GACGGCTGA
|
Protein sequence | MSNPAQRATK LFVQTFGTKA DAYYQAPGRV NIIGEHTDYN DGFVLPAAIN FHTVIAVKKR EDDRFRVVTE AFPGELREWR FGEEGEVTAG GDWVNYLKGF TQAVGQAGLK AKGLDLAVVS SIPMGAGFSS SGALEIAFGT ALNDTCQLHL SPMAIAQLAQ RGESRFHGST CGVMDHMTSA LAEADSALLI DCLDLDIEAV LIPDNLSLII VHSPLDPKLL EEAYKARADE CRDAAEFFGL DSLRDLELDE LKAASDVLDE TLYKRARHVI SENLRTQSAG RALKRGDVAR LSELMALSHA SLRDDFELMV PEVETLVQIM AQAIGDRGGV RMTDGCSVVA LVEHDLTDAV VHAVESEYPA KTGLEPVLYM CAPSAGAGRI DG
|
| |