| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0535 |
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| Symbol | |
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| ID | 4602790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 659093 |
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| End bp | 660118 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779871 |
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| Product | aldose 1-epimerase |
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| Protein accession | YP_926415 |
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| Protein GI | 119773675 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2017] Galactose mutarotase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0136204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCGTC ACTCAGTGCT CGACGCCTGG AAGGATCCCA GGGGCGGAGA AATTGAACGG
GTTCGATTGG ACAACGGCCA GTTGGCCATC GAAGTACTGA GTCTGGGCGG TATTATTCGC
TCACTATGGG CTCCTGACAG CCGGGGCGAG CGCGCCAATC TGGTACTTGG GTGTGACAGT
CTTGAAGACT ATCTCGCCCA GAATGCGCAC CTTGGCGCCA TTGCCGGACG CTATGCCAAC
CGTATCGCCC TCGGCAAATT GCACTATGAC GGTGAAGACT TCCAACTGGA TATCAATCAG
GCAACCAACT GCCTCCATGG TGGCCATGAG GGTTTTAATC GCAAACAATG GGCGCTGGGA
TTGCTTCCCG ACGGTGTGCG TCTGAGCCTT AGCAGCCCAG ATGGCGATAT GGGGTTTCCA
GGCAATTGCT CGGTCCAGCT GGATTACCGG CTAGCGGGCA ATAACCTCTA CGTGGAAATC
ATGGCGATGA CCGATAGGCC CTGCCCGGTC AACCTTACCC AGCACAGCTA CTTTAACCTT
GACGGACGTG CCGATTGTCT CGATCACACA GTGACCATGC ACGCCAGGGC GTTTCTGCGC
TGTAACGAGG CAGGGATACC CACAGGACGC GCCACCACCG CAGGCACACC GCTGGCATTG
CAGGATGTTC GCCTTGGTGA CCGGGTACAA CACCCGGACC TTGCCAGCAC ACGCGGTTTT
GACCACTGTT TTATTATCGA TAAGACACAG GACGAGCTGG CGTTGGCAGC CGAGCTACAC
AGCCCACACT CGGGCAGACT CCTTAAACTC TATACCAATC AGCCGGGCGT ACAGCTCTAC
GGGGCGAATT TTCTCGATGG CGAACGGGGC AGGCAGGGCA AAATTTATCG ACCCTATCAG
GGTGTTTGCC TCGAACCACA GCTGTTTCCC GATGCACCAA ATCAACCCGA TTTGGGCAAG
GCCTGGTTAA TGCCGGGGGA GATTTATCAT CATATCAGTC GTTATCAGTT CGAGGTAAAA
GACTGA
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| Protein sequence | MVRHSVLDAW KDPRGGEIER VRLDNGQLAI EVLSLGGIIR SLWAPDSRGE RANLVLGCDS
LEDYLAQNAH LGAIAGRYAN RIALGKLHYD GEDFQLDINQ ATNCLHGGHE GFNRKQWALG
LLPDGVRLSL SSPDGDMGFP GNCSVQLDYR LAGNNLYVEI MAMTDRPCPV NLTQHSYFNL
DGRADCLDHT VTMHARAFLR CNEAGIPTGR ATTAGTPLAL QDVRLGDRVQ HPDLASTRGF
DHCFIIDKTQ DELALAAELH SPHSGRLLKL YTNQPGVQLY GANFLDGERG RQGKIYRPYQ
GVCLEPQLFP DAPNQPDLGK AWLMPGEIYH HISRYQFEVK D
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