| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0517 |
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| Symbol | |
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| ID | 4602772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 636932 |
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| End bp | 637732 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779853 |
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| Product | D-beta-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_926397 |
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| Protein GI | 119773657 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.36477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGTG GACAAAGGAG TTTAGAAGGC AAGGTTGGGC TTATCACAGG CTCCACCAGT
GGGATTGGCC TGGCCACGGC TCAGGTACTG GCCGAGCAGG GTTGCAACCT GATATTGCAT
GGGCTGTTGC CTGAGGATGA AGGGCAATCT ATGGCGGCCG ACTTTGCGGC GCAGTACCGC
ATTCGCACCT TTTTCAGCAA TGCAGACTTA CGCCAGCCAG AGAGCATCCA TCGCTTTATG
GCAGAAGGCA CAAAAGCACT CGGCAGCATC GACATTCTTA TCAACAATGC CGGGATTCAG
CACACCGACT CAGTGGCCAG TTTCCCGATT GAAAAATGGA ACGATATCAT TGCGATAAAT
CTGTCTTCAG CCTTTCACAC CATGCAACAG GCCGTACCCG CCATGGCGCA AAAGCGCTGG
GGCCGGATCA TCAATATCGC CTCGGTGCAC GGCTTGGTGG CATCGGTGAA CAAGGCCGCC
TATTGCGCCG CCAAGCACGG TATTGTGGGC CTGACCAAGG TGGTTGCCAT CGAGTGCGCC
GAGCAGGGCA TTACCGTCAA TGCCATCTGC CCCGGCTGGG TTGATACCCC TCTCATCAAT
AAGCAGATAG AAGCCGTCGC CAACACTAAG GGGCTGGACT ATCACGAAGC CAGATACCAA
TTGGTGACAG CCAAACAGCC GCTGCCGGAA ATGCTCGACC CCAGGCAAAT AGGTGAATTT
GCGCTGTTCC TCTGTGGTGA TGCTGCCCGC GGCATCACAG GGGCTTCACT CGCCATGGAC
GGGGGCTGGA CGGCCCAGTA A
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| Protein sequence | MSGGQRSLEG KVGLITGSTS GIGLATAQVL AEQGCNLILH GLLPEDEGQS MAADFAAQYR
IRTFFSNADL RQPESIHRFM AEGTKALGSI DILINNAGIQ HTDSVASFPI EKWNDIIAIN
LSSAFHTMQQ AVPAMAQKRW GRIINIASVH GLVASVNKAA YCAAKHGIVG LTKVVAIECA
EQGITVNAIC PGWVDTPLIN KQIEAVANTK GLDYHEARYQ LVTAKQPLPE MLDPRQIGEF
ALFLCGDAAR GITGASLAMD GGWTAQ
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