Gene Sama_0510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0510 
Symbol 
ID4602765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp625127 
End bp626077 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content54% 
IMG OID639779846 
Producthypothetical protein 
Protein accessionYP_926390 
Protein GI119773650 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAACCT GGTGGTTGTG GGCTGCGTTT GCGGCCATAG TGCTGACCCT TTTGTGGGTC 
GATATCAAGT TTGTAGGCGG CAAGAGTCAT AAAGTCTCGA TGAAGGAGGC GCTGACCTGG
TCGCTGGTGT GGTTTGTGGT GGCCATGGCG TTTAACGCCG GTGTCTGGGC CTGGCTCGAT
TACTCGGTTG GCCGTGAGAT TGCCAACGAC AAGGCGCTGG AGTTCCTGAC TGCCTATGTG
ATTGAAAAAG CATTGGCAGT GGATAACGTC TTCGTTTGGT TGATGATTTT CTCTTACTTT
GCCATTCCGC CCGAGCTGCA ACGGCGGGTG CTGTTGTACG GGGTGCTGGG TGCCATTGTG
ATGCGCGCCG GTATGGTGTT TGGTGGCATT TGGCTTATCA ATCAGTTCCA CTGGCTCCTG
TACGTATTCG GCGCCTTCCT GGTGTTTACC GGCGTAAAAA TGCTGCTGAC CGCAGACAAG
GAAACCGACC TTTCCACCCA TCGCGGACTG ATTTGGCTTC GCAGCAAAAT GAAGCTCACT
GAGCATCTGG AAGGCGAGCG TTTCTTTGTG CTGCGTGAAG GGGTGAAATA CGCCACGCCA
CTGTTTTTGG TGCTGATTTT GGTGGAGATA AGCGACCTGA TTTTTGCGGT GGACAGTATT
CCGGCTATTT TTGCCGTGAC CACTGACCCC TTTATCGTGC TCACCTCCAA CATCTTCGCC
ATCATGGGCC TGCGGGCCAT GTACTTCCTG CTGCAAGGCG CAGCCGAGAA GTTCAGCCTA
CTCAAGTATG GCCTGGCCAT CATCCTGGTA TTTATCGGCT TTAAGTTGAT GCTGATAGAT
GTGTTCCATC TGCCCATTGC TGTGGCGCTG GGGGTGGTTG GCACCATCCT GGTGGGATCC
ATGCTGCTGA GCCTGTGGGT GAACCGTAAT AAGCCCACCA GGTTTGAATA A
 
Protein sequence
METWWLWAAF AAIVLTLLWV DIKFVGGKSH KVSMKEALTW SLVWFVVAMA FNAGVWAWLD 
YSVGREIAND KALEFLTAYV IEKALAVDNV FVWLMIFSYF AIPPELQRRV LLYGVLGAIV
MRAGMVFGGI WLINQFHWLL YVFGAFLVFT GVKMLLTADK ETDLSTHRGL IWLRSKMKLT
EHLEGERFFV LREGVKYATP LFLVLILVEI SDLIFAVDSI PAIFAVTTDP FIVLTSNIFA
IMGLRAMYFL LQGAAEKFSL LKYGLAIILV FIGFKLMLID VFHLPIAVAL GVVGTILVGS
MLLSLWVNRN KPTRFE