| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0509 |
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| Symbol | |
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| ID | 4602764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 624129 |
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| End bp | 625034 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639779845 |
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| Product | NAD dependent epimerase/dehydratase family protein |
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| Protein accession | YP_926389 |
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| Protein GI | 119773649 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATA TCATGGTGAC GGGCGCAACC GGGCTTCTGG GGCGTGCCGT GGTGAAGTCT
TTGTCTGCGA GCCACACAGT CACGGGCACT GGTTTCAGCC GCGCCGCCGA AGGCATTCTG
CGTCTGGATT TAACCGATGC CGACGCAGTG GCAGCAGCGG TGGCTGAGAT TGCACCTCAG
GTGATAGTGC ACTGCGCCGC CGAGCGCAGG CCCGATGTCT CAGCGCAAAA CCCGGACGCA
GCCAAGGCGC TGAATCTGTC AGCCACCGAG GCGCTGTGTC AGGCCGCCAA GGCTTGTGGT
GCCTGGCTGA TTTATATCTC CACCGACTAT GTGTTCGATG GCACTGAGGC GCCCTATGCG
GAAGATGCCG CGCCCAACCC AGTCAATTTT TACGGTGAGA CCAAGCTGAT GGGCGAGCAG
GCGGTCACGC GGCTGCTCCC TGAGTCGGCC ATTTTACGAC TGCCCATTTT GTATGGTGAA
GTTGAGCGCC TGAGCGAGTC GGCGGTGCTG GTGCTGATTG AGCAGCTTTT GGATTATCAA
AAACAAGGGG TGGATGACTG GGCCGTGCGC AGACCAACCT CGACAGCGGA TATTGCCGAA
GCCATCAAGG GCATGATTGC CAAGCATGTT GAGGGTGAGA AAATCAGCGG CATCTATCAT
TTCAGTGCTG CCGAAACCAT GACCAAACAC GGCATGGTGG TGGCGCTGGC AGAGGTGTTG
GGGAAAGACA GCGGCCATTT GATTGCCCAG TCGAGCCCAA CAGATACCGC CAAGCGACCA
AAGGATTGTA CCTTGAGCTG CAAGCGGCTT GAGGCGCTGG GGCTGCTCAA TACCCGACCT
TTCAGGGTGG CGGCGGCCGA AGCGCTTACT GCCTCGGCGG CGGCGCTTGC CAGGGCCGGC
AAGTAA
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| Protein sequence | MANIMVTGAT GLLGRAVVKS LSASHTVTGT GFSRAAEGIL RLDLTDADAV AAAVAEIAPQ
VIVHCAAERR PDVSAQNPDA AKALNLSATE ALCQAAKACG AWLIYISTDY VFDGTEAPYA
EDAAPNPVNF YGETKLMGEQ AVTRLLPESA ILRLPILYGE VERLSESAVL VLIEQLLDYQ
KQGVDDWAVR RPTSTADIAE AIKGMIAKHV EGEKISGIYH FSAAETMTKH GMVVALAEVL
GKDSGHLIAQ SSPTDTAKRP KDCTLSCKRL EALGLLNTRP FRVAAAEALT ASAAALARAG
K
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