Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0493 |
Symbol | |
ID | 4602748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 606322 |
End bp | 606675 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639779829 |
Product | transcriptional regulator |
Protein accession | YP_926373 |
Protein GI | 119773633 |
COG category | [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.877737 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGAGG AGGCGGCGAT GGACGTAGTG AGCTTTTTCA AAGCGCTGGC CGATGATACC CGGCTTAGAA TCCTTATGCT GATTGTGGGG GAAACCGAGC TTTGTGTCTG TGAGCTGACG GAGGCGCTTA ATCTCAGTCA GCCCAAGATC TCACGCCATT TACGTCTTTT AAAAGACGCA GGCTTGCTGA CAGACAGGCG TCAGGGGCAG TGGGTGTACT ACCGCCAGGC CGAGGACTTG CCACTGTGGT GTGCCGGGCA ACTGGCACAT TTGGCACAGA AAGGACCAGA CTGGCTGGCC GATGAAAAAC AACGCTTGAC GACCATGGGT TGCAGACCCG GACGCTGCTG TTAA
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Protein sequence | MPEEAAMDVV SFFKALADDT RLRILMLIVG ETELCVCELT EALNLSQPKI SRHLRLLKDA GLLTDRRQGQ WVYYRQAEDL PLWCAGQLAH LAQKGPDWLA DEKQRLTTMG CRPGRCC
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