| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0492 |
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| Symbol | |
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| ID | 4602747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 604192 |
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| End bp | 605688 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779828 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_926372 |
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| Protein GI | 119773632 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATACT CCAGCTATAT TTCGCTGGCA CTCTACTTTA TTGCCATGTT GGCAATAGGG
CTGTTTGCCT ATCGTAATTC CACCGACGAT CTTGCGGGTT ATATGCTTGG CGGGCGTCAG
GTCAGCCCGC ACGTCACCGC CCTGTCTGCC GGTGCATCCG ATATGAGCGG CTGGATGCTG
ATGGGGCTGC CCGGCGCCAT GTTTACCATG GGCTATGATG CTCTGTGGAT TGCCGCTGGC
CTGCTGCTGG GGGCGCTGCT CAATTATCTG CTGGTTGCAC CCAGACTCAG AGTGTTTACT
GAAGCAGCTG ATGACGCCCT GACACTGCCA GACTTTTTCA GCAAGCGCTT CAATAAAGAC
AACGGCTCGG TGCGGATGAT TTCAGCGGCG GTGATTATCC TGTTTTTCAC CCTGTATACC
TCAGCCGGAC TGGTCGCCGG GGGTAAGTTT TTTGAGTCGG CTTTTGGACT GGGCTATCAA
ACCGGCTTGT TGCTGACTGT GTCTGTGGTG GTGGCATACA CCCTGCTCGG CGGATTCCTG
GCGGTCAGCC TGACTGACTT TGTTCAGGGC TGTATCATGT TTCTTGCACT GGTGTTGGTG
CCGTTGGTTG CGCTTCAGGA ATTCAACAGC AGTACCGACA TGCTGGCGCA GGCCAGCCGC
AGCATTACCC CATTGGCCGA CTCTTTTGAG CACATGGGGA TTCTGGCGAT AGTCTCAAGC
CTCGCATGGG GGCTGGGTTA CTTTGGGCAA CCGCATATTA TTGTGCGATT TATGGCAATT
CGGTCGGTGA AGGACATTGC TGTTGCCCGC AATATCGGCA TGAGCTGGAT GTTGGTCACC
ATATTAGGCG CGCTGGCAAC CGGACTTATC GGCGTGGCTT ACGTGAATAA ATTCAAGCCG
GGACTGGACG ATGGCGAGAC CATCTTCATT TTGTTCGCTG AAATCCTGTT TCATCCGCTC
ATCAGTGGGT TCCTGCTGGC AGCCATTCTG GCGGCCATCA TGAGCACCAT TTCCTCGCAG
TTACTGGTGT CATCAAGCTC TCTGTCGGAG GATGTGTACC GCGCCCTGTT TCACAAAGAG
ATGGACCAGA AAGCCACGGT TACGGCGGGA CGTATCGGTG TGCTGGCCGT GGCGGCGGTG
GCAACGCTGC TGGCGCTGGA CAATAACGCC AGCATCCTCT CGCTGGTGAG CAATGCCTGG
GCCGGTTTTG GCGCCGCCTT CGGCCCCCTC GTACTCCTGA GTTTATTCTG GCCCCGCATG
ACCCACAGCG GCGCAGTAGC AGGCATACTC TGTGGCGCAG GCACTGTGTT GGTGTGGAGC
CAGGTTCCAC TGCTCGAAAA CGGCTTACCC TTATCCAGTC TCATTTATGA GATTGTGCCC
GGGTTTATCG TAAGCACTCT CGCCATAGTA CTGGTGAGTT ATGCAGACCA GGCCCCCTGT
AAATCGACTC AGAAAGCCTT CAAGCTCAGC CGGGATAGGC TGAAACAAGT CAGCTGA
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| Protein sequence | MEYSSYISLA LYFIAMLAIG LFAYRNSTDD LAGYMLGGRQ VSPHVTALSA GASDMSGWML
MGLPGAMFTM GYDALWIAAG LLLGALLNYL LVAPRLRVFT EAADDALTLP DFFSKRFNKD
NGSVRMISAA VIILFFTLYT SAGLVAGGKF FESAFGLGYQ TGLLLTVSVV VAYTLLGGFL
AVSLTDFVQG CIMFLALVLV PLVALQEFNS STDMLAQASR SITPLADSFE HMGILAIVSS
LAWGLGYFGQ PHIIVRFMAI RSVKDIAVAR NIGMSWMLVT ILGALATGLI GVAYVNKFKP
GLDDGETIFI LFAEILFHPL ISGFLLAAIL AAIMSTISSQ LLVSSSSLSE DVYRALFHKE
MDQKATVTAG RIGVLAVAAV ATLLALDNNA SILSLVSNAW AGFGAAFGPL VLLSLFWPRM
THSGAVAGIL CGAGTVLVWS QVPLLENGLP LSSLIYEIVP GFIVSTLAIV LVSYADQAPC
KSTQKAFKLS RDRLKQVS
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