| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0490 |
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| Symbol | |
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| ID | 4602745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 600712 |
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| End bp | 602559 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779826 |
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| Product | Zn-dependent protease with chaperone function |
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| Protein accession | YP_926370 |
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| Protein GI | 119773630 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0501] Zn-dependent protease with chaperone function |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTCA ATCAGGGAAC ACTCGACGAG CTGATGCTAA AGGCCCAACA GGACCTCAGC
AGCGACCAGC AAAGCTACAA ACGTAAACTC AACCTCTATG TCTGGATGGC CTACGGCGTC
ATCCTGTTAT TGCTGCTGCT TTTTGTCGGC CTGGTGGCAG GCACTGTGGG ACTGGCGTTC
ACAAGCTCTG TATTCCTGGT GTTATTACTC AAGAAAAAGC TGATTATTCC GCTGCTGATT
ATCGGCTGGA TGCTGGGAAG AGCACTCTTT CTCGGGGCCG GTAAACCCGA GGGATATAGG
CTCAGACGCG CCGAGGCTCC CCTGCTGTTT GGGCTGGTCA ATGAGCTGAC CAAAAGCCTA
AAGACGCCCA GAGTGCACAA CATCATTGTC ACGCCGGAAT TTAACGCCGC CATGGCGCAA
ACGCCCCGCT GGTTTGTGGG CGGCCCCACC GAGAACACGC TTATAATAGG GCTTGAGCTG
CTGATGTCAC TGTCCAAAGA AGAGCTCAAG GCGGTATTGG CCCACGAGCT TGGGCATCTG
AGCGGCGACC ACGCCAAATT CAACGGCAAG ATTTACCGGG CCCGCGCCAT GTGGGAGCAA
ATGATGCACA GCTTCGAAAG CTCCGGCTCC CTGGTTACCT ACCCCATGCG CAAGTTTTTC
AGCTGGTATG CGCCGCGCTT TTCGGCCTAT TCATTCGCAC TGGCCAGACT CAACGAGTAC
GAAGCCGATT TGTCTGCCGC CAAGCAGACC TCGGCAGCCA CTTTTCAGTC GGCATTGGTC
AAAACCTCAC TGCTGGCCGA AATCACAGAT GAAGATTTCT GGCCACAATA TTACCGCCGT
GCCTATGAGC AACCCGCCCC TGATACCCTG CCCTATACCG CCTTCAAGCA GTTTATAGAT
GCAGGTGAAT TTGGCGACCT GCCGCTGCGA CTTGCAAAGG TGATGGCCGA ACGCACCTCG
CCCCACAATA CCCACCCCTG CACCAAAGAC AGAGTAGAAG CGCTGGGCGC ATTCGATGAA
GACGTACTGA AACTCAGGGA AAACAATGCC TGGCAGTTGC TCGGTAAGTC GGCCCATAAG
ATCATTAAAG AATTCAATGA TAACTGGCTG ATGTATAACG GCCAGGAGTG GCAATTCCAG
TACCAGCTGG CACAGGAACA ATTGGCCAGA CTCAAGGAAC TTGAGCCGAT GGACCCCAAT
CAGTTATCGC TGGATCAAAA AGAGGAACTG GCGTTCCTTT TGGATAAGTT CCGGCGAGAC
CCCGAACGGG TCGTGGCACT CTACGACGGC ATCATGGCAT CCAAACCCCA TGATCTCGAC
ACGGCTTTGC GTTTGGCACA ACTCTACGCC AAAGCAGGCA ATCCACGTTG TCTGCCACTG
TTCCGGACCT GCCTTGCCAA GGATGAACTG GTTAACGATG CCTGCATGGG CGCCTATGGC
TACTACCTGC ATCAGGGCGA CGGCAATCAG GCCAACGAGT GGCTGGATAA ACTGGTTGCC
CACGGTGAGA TAGCCGAGCG CGCCCGGCAG GAACGCATCA CCGTCGGCGC CAAAGACCCC
TTGATGGCAC CAACCCTGCC CAAAGAGGCC ATAGATGCAC TCGCCGCGCG GCTGATTGCG
ATAGACAGGG TGGAGGATGT GTGGCTTTGC CAAAAGTCGG TGCAGTACTT CCGTGACAGC
CCTGTGGTAG TGCTTGCCAT CAAGGTGAGC GGCTGGACCG GCAAAGACAA GGTGCTGGAA
CAATGCTTTG GGCAACTCCC GGCCGATTGG ACCAGTTTTA TCGTGACCAA GGATATGGAC
TCGGCGCTGT TTAAAAAGGT GCAAACCAAA GGCACTCAGA TTATTTAA
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| Protein sequence | MEFNQGTLDE LMLKAQQDLS SDQQSYKRKL NLYVWMAYGV ILLLLLLFVG LVAGTVGLAF
TSSVFLVLLL KKKLIIPLLI IGWMLGRALF LGAGKPEGYR LRRAEAPLLF GLVNELTKSL
KTPRVHNIIV TPEFNAAMAQ TPRWFVGGPT ENTLIIGLEL LMSLSKEELK AVLAHELGHL
SGDHAKFNGK IYRARAMWEQ MMHSFESSGS LVTYPMRKFF SWYAPRFSAY SFALARLNEY
EADLSAAKQT SAATFQSALV KTSLLAEITD EDFWPQYYRR AYEQPAPDTL PYTAFKQFID
AGEFGDLPLR LAKVMAERTS PHNTHPCTKD RVEALGAFDE DVLKLRENNA WQLLGKSAHK
IIKEFNDNWL MYNGQEWQFQ YQLAQEQLAR LKELEPMDPN QLSLDQKEEL AFLLDKFRRD
PERVVALYDG IMASKPHDLD TALRLAQLYA KAGNPRCLPL FRTCLAKDEL VNDACMGAYG
YYLHQGDGNQ ANEWLDKLVA HGEIAERARQ ERITVGAKDP LMAPTLPKEA IDALAARLIA
IDRVEDVWLC QKSVQYFRDS PVVVLAIKVS GWTGKDKVLE QCFGQLPADW TSFIVTKDMD
SALFKKVQTK GTQII
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