Gene Sama_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0487 
Symbol 
ID4602742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp598185 
End bp598682 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content52% 
IMG OID639779823 
ProductN-acetyltransferase 
Protein accessionYP_926367 
Protein GI119773627 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATAG CTTCCTGCCA ATTCGAACAA CACGGCGCCA TCATTCAGCA CATCTTTAAC 
CACGCCATCG CCAACACCAC TGCACTCTAC GAATATGAGC CAAGGGACAT GGCAAGAATT
GCAGCCTGGT TTGCACAAAA GGAAGGTTTA TACCCTGTGC TGGGCGCCTT TGATGAAAAG
GGTGACTTGA TGGGCTTTGC CAGCTATGGG CCATTCCGGG GCTTTCCGGC AAACCTCTAC
TCGGTGGAGC ACTCTGTGTA TGTTCATTCG GATCACAGGG GAAAAGGGGT GGCGCTGAAG
CTGATGCAGG CACTTATTCA AGCGGCGAAG GACGCCGGAT TGCACATGAT GGTGGGCGGT
ATAGATGCCA GTAACAATGC CAGCATCGCC CTGCACAAAA AGCTCGGTTT TGAACATGCC
GGCACGTTAA AAGAGGTGGG CTACAAGTTT AACCGCTGGC TGGATTTGGC GTTTTATCAG
CTGAAGCTAA GCGAATAA
 
Protein sequence
MHIASCQFEQ HGAIIQHIFN HAIANTTALY EYEPRDMARI AAWFAQKEGL YPVLGAFDEK 
GDLMGFASYG PFRGFPANLY SVEHSVYVHS DHRGKGVALK LMQALIQAAK DAGLHMMVGG
IDASNNASIA LHKKLGFEHA GTLKEVGYKF NRWLDLAFYQ LKLSE