| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0482 |
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| Symbol | |
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| ID | 4602737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 592968 |
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| End bp | 594329 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779818 |
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| Product | PmbA protein |
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| Protein accession | YP_926362 |
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| Protein GI | 119773622 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.325985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAAGA GCAAGACAGT GTCATCTAAC AAAATTGAAT TGGAATTGAA CGCCCTCAAG
GATGCCGTGG CCATGGCGCT GGATTACGCC AACACCCTGG GAACAGGCGC CGCCGAAGTG
GCTATCAGCA AGCAACAGGG ATTGTCGGTT TCTACCCGTC TCAAGGAAGT GGAAACCGTT
GAATTCAATA AAGACGGTGC ACTGGGGATC ACGGTATTCC GCGATGGCTG CAAAGGCAGT
TCATCCACCT CGGATTTAAG CCCCGAGGCT ATCCGGCAGG CAGTAAAGGC CGCCGATGAT
ATTGCCCGCT ATACCTCCGC CGACCCCTGT AACGGTTTGG CAGAAGCCAG TTTGATGGCT
AAAACCGTGG CTGATTTGGA TCTCTATCAT CCCGAGAGCC TGACACCGGA AGAGCTGACC
GAACTGGCCA TTCGCGCAGA GGCGGCAGCC CTTGACGCCG ACCCGCGCAT TAAAAATTCC
GATGGCGCCA GCGCCAACGC CCATACCGGC ATCAAGGTGT ATGGCAACAG CCATGGCTTC
CTCAATGGCT ATTGCTCCTC ACGTTACTCC TTAAGCTGCG TGGTGATTGG GGAAGAGGAC
GATGGCAACA TGCAGCGGGA CTACGATTAC AGCATTTCCC GCAAATATGC CGAGCTGCTC
TCGCCCGAGC TGGTGGGGCA GAAGGCTGCA GCCAAGACGT TAAGCCGCCT CGGTGGCCGC
AAAATTGCCA CAGGTACCAT GCCAGTGCTC TTTGCCCACG AAGTGGCAAC CGGCCTGATT
GGTCATCTTA TCAGTGCCAT CAGTGGCTCC AGCCTGTATC GCAAATCAAG CTTCCTGTTG
GATGGGCTGG ACACCCAGGT GTTTCCCGAG TGGTTGAATA TCCGCGAAGA GCCACACCTG
CTGGCAGGTC TTGCCAGTGC CCCATACGAC AGTGAAGGTG TGGCGACTGT GGACAGAGAC
ATCATCAAGG ACGGATTGCT CGCCACCTAC CTGCTGACCT CCTATTCGGC CCGTAAACTG
GGGATGACCA ATACAGGCCA TGCCGGCGGT ATTTACAACT GGACCCTGAA TGACACTGGT
GTGGATTTCG ATGCGCTGGT ACGCCAGATG GACAAGGGGC TGATTGTGAC TGAGGTAATG
GGGCAGGGGG TGAACATGGT GACGGGTGAC TACTCCCGTG GCGCCGCCGG ATTCTATGTG
GAGAACGGTG AAATCCAGTA CCCGGTGGAA GAAATTACCA TCGCCGGTAA CCTCAAAGAC
ATGTATCGCA GTATTCAGGC GGTGAGTCAG GACAGAGACC TGCGCTCTTC CATCCGTACC
GGTGGTATTT TGCTGGATAG CATGAAGGTC GCCGGCAACT GA
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| Protein sequence | MNKSKTVSSN KIELELNALK DAVAMALDYA NTLGTGAAEV AISKQQGLSV STRLKEVETV
EFNKDGALGI TVFRDGCKGS SSTSDLSPEA IRQAVKAADD IARYTSADPC NGLAEASLMA
KTVADLDLYH PESLTPEELT ELAIRAEAAA LDADPRIKNS DGASANAHTG IKVYGNSHGF
LNGYCSSRYS LSCVVIGEED DGNMQRDYDY SISRKYAELL SPELVGQKAA AKTLSRLGGR
KIATGTMPVL FAHEVATGLI GHLISAISGS SLYRKSSFLL DGLDTQVFPE WLNIREEPHL
LAGLASAPYD SEGVATVDRD IIKDGLLATY LLTSYSARKL GMTNTGHAGG IYNWTLNDTG
VDFDALVRQM DKGLIVTEVM GQGVNMVTGD YSRGAAGFYV ENGEIQYPVE EITIAGNLKD
MYRSIQAVSQ DRDLRSSIRT GGILLDSMKV AGN
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