| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0477 |
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| Symbol | |
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| ID | 4602732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 587413 |
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| End bp | 588966 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779813 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_926357 |
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| Protein GI | 119773617 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0917942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATCAT CCGCCACTGG AATTAGAGTT AAAACTCTAG AGGTGTCAAT GAAACCTATC
ACCACACTGG TTTGTCTGCC AAAAATGGTG TGTTCGTCCC GTCAGCGGAC AAAACTTGCG
CTTGTTGCGC AAAAGGGCCG TGTTGCTAAA TCGGCTCTGT TTGCGACCGT GCTTGCGTCT
TGCGCTGGTA TGTCTGTGAT AGCCACAGCT GCCCATGCCC AGAGTTTTGA TGCGGCCTGG
CAGCAGCTGC AACAGGTTAG CGATAAGCTG GCGGCCTCCA GTGCCAAGGT CGACCGTGCC
CGGGCCGAGC GTGACGCCGG TGAAGACATG AATCTGCCGG AGTTGTCGCT CAATGGCAGC
TATACCCGGC TGGAAAAACC GCTGGAGATG GATCTTCGGG ATCTCAATCC TATGGCGTCT
CTCGACCCCG CAAGCCTTCC GCCCGCTTTG GGTGCGGCCC TTGGCAGTAT CCCCGGCGAA
CTCTTTATTA CTCCTTTCAC TGAGCAGGAC ATTTTCCGTG CAAGCCTGTC GGCGATGTGG
CCCATCTATA CAGGCGGTCG CATCAGCGCG GCCCAGGGTA TACACGAGGC CCTGCTTGCC
GAAGAAGAGC AGCAGCGTGA GCTGACCCGC CGCGAGCTAT TTACCACTCT GGTGGACAGA
TACTACGGTG TGATGGTGGC GGCGGAGCTG GTCCGCACCC AGGATAAGTT GGTGGCGTCC
CTCGAGAAAC ACGTCGATCA TGCCCGCAAG CTTGAGGCCC ATGGACAAAT CGCCAAAGTC
GAGCGCCTCA ATGCCGAAGT GGCGCTGGAT AACGCCAGAG TGCAGGCCTC CAGTAGTCGT
CGTCAGTACG AAATGACCAA TATCGCCCTG AAAAGCCTGC TGAAAAAGGC CGAAACACCT
TCATCAGGGC TTTTTATTGC GCTCAGCGAG CCCTCACTGC CACAACTGGC GGAACTGACA
CAAAAGTCAC ATCCGGCACT CAAGTTACTG GATGCGAAGG AAACCCAGGC CAACGGGCTG
ATTGAAGTTG AGCGCGGCGC CTATAAACCG ACGGTATTCC TTTACGGCAA TTACACCCTG
TATGAGGATG ACAGCCTGTT CGCGAAAATG GAGCCGGACT GGATGCTGGG GGTCGGTTTT
AAGATGCCGC TGCTCTCCCG CGATGGCCGC AGTGGCAAGG TCGAAGCGGC CCACAGCGCA
CTGTTGCAGG CCCGTCACAC CAAGGCACAA ACCCGGGAAG ACTTGAGTCT GCTGCTGGAG
CAGAGCTTTC GACAGCTTAG GCAGGCCGAA GAAGAATATC GTGCCCTCGA CAGCTCGCGG
GCGCTGGCGA TGGAAAATCT GCGGCTTCGT GAACTTGCCT TTAACCAGGG CATGTCCACC
TCCATCGAGC GGGTGGACGC CGAGCTGAAA CTCACCGCCG TGGATACCCA GCAGCTGGGT
GCCAAGTTTC GTTATGTGCA GGCCTATGCG CGCCTGATGG CCATCTCGGG CCAGTTGGAT
GAATTTATCG GTCAGGCCCA GCGAGCGTCT GCCACCATGG GAGAAAAACA ATGA
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| Protein sequence | MLSSATGIRV KTLEVSMKPI TTLVCLPKMV CSSRQRTKLA LVAQKGRVAK SALFATVLAS
CAGMSVIATA AHAQSFDAAW QQLQQVSDKL AASSAKVDRA RAERDAGEDM NLPELSLNGS
YTRLEKPLEM DLRDLNPMAS LDPASLPPAL GAALGSIPGE LFITPFTEQD IFRASLSAMW
PIYTGGRISA AQGIHEALLA EEEQQRELTR RELFTTLVDR YYGVMVAAEL VRTQDKLVAS
LEKHVDHARK LEAHGQIAKV ERLNAEVALD NARVQASSSR RQYEMTNIAL KSLLKKAETP
SSGLFIALSE PSLPQLAELT QKSHPALKLL DAKETQANGL IEVERGAYKP TVFLYGNYTL
YEDDSLFAKM EPDWMLGVGF KMPLLSRDGR SGKVEAAHSA LLQARHTKAQ TREDLSLLLE
QSFRQLRQAE EEYRALDSSR ALAMENLRLR ELAFNQGMST SIERVDAELK LTAVDTQQLG
AKFRYVQAYA RLMAISGQLD EFIGQAQRAS ATMGEKQ
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